RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
NF1-203ENST00000422121 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 TEFQ10587 303 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 ZNF496Q96IT1 587 aaPredicted RBP13.16□□□□□ -0.3
NF1-203ENST00000422121 ARXQ96QS3 562 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
NF1-203ENST00000422121 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
NF1-203ENST00000422121 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
NF1-203ENST00000422121 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
NF1-203ENST00000422121 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
NF1-203ENST00000422121 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
NF1-203ENST00000422121 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
NF1-203ENST00000422121 DLG5Q8TDM6 1919 aa13.14□□□□□ -0.31
NF1-203ENST00000422121 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
NF1-203ENST00000422121 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
NF1-203ENST00000422121 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
NF1-203ENST00000422121 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
NF1-203ENST00000422121 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
NF1-203ENST00000422121 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
NF1-203ENST00000422121 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
NF1-203ENST00000422121 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
NF1-203ENST00000422121 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
NF1-203ENST00000422121 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
NF1-203ENST00000422121 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
NF1-203ENST00000422121 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
NF1-203ENST00000422121 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
NF1-203ENST00000422121 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
NF1-203ENST00000422121 GYS1P13807 737 aa13.11□□□□□ -0.31
NF1-203ENST00000422121 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
NF1-203ENST00000422121 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
NF1-203ENST00000422121 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
NF1-203ENST00000422121 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
NF1-203ENST00000422121 POLD1P28340 1107 aa13.1□□□□□ -0.31
NF1-203ENST00000422121 RIPK4P57078 832 aa13.1□□□□□ -0.31
NF1-203ENST00000422121 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
NF1-203ENST00000422121 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
NF1-203ENST00000422121 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
NF1-203ENST00000422121 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
NF1-203ENST00000422121 A1BGP04217 495 aa13.09□□□□□ -0.31
NF1-203ENST00000422121 EIF5P55010 431 aaKnown RBP13.09□□□□□ -0.31
NF1-203ENST00000422121 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
NF1-203ENST00000422121 RUNDC1Q96C34 613 aa13.09□□□□□ -0.31
NF1-203ENST00000422121 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
NF1-203ENST00000422121 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
NF1-203ENST00000422121 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
NF1-203ENST00000422121 RFC4P35249 363 aa13.08□□□□□ -0.32
NF1-203ENST00000422121 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
NF1-203ENST00000422121 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
NF1-203ENST00000422121 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
NF1-203ENST00000422121 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
NF1-203ENST00000422121 NEFMP07197 916 aa13.07□□□□□ -0.32
NF1-203ENST00000422121 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
NF1-203ENST00000422121 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 STARD3NLO95772 234 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 MMP10P09238 476 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 TM4SF1P30408 202 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
NF1-203ENST00000422121 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
NF1-203ENST00000422121 NLGN1Q8N2Q7 840 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
NF1-203ENST00000422121 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
NF1-203ENST00000422121 APAF1O14727 1248 aa13.05□□□□□ -0.32
NF1-203ENST00000422121 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
NF1-203ENST00000422121 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
NF1-203ENST00000422121 DDR1Q08345 913 aa13.05□□□□□ -0.32
NF1-203ENST00000422121 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
NF1-203ENST00000422121 COL15A1P39059 1388 aa13.05□□□□□ -0.32
NF1-203ENST00000422121 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
NF1-203ENST00000422121 CHL1O00533 1208 aa13.04□□□□□ -0.32
NF1-203ENST00000422121 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
NF1-203ENST00000422121 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
NF1-203ENST00000422121 ANP32CO43423 234 aa13.03□□□□□ -0.32
NF1-203ENST00000422121 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
NF1-203ENST00000422121 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
NF1-203ENST00000422121 HAX1O00165 279 aa13.02□□□□□ -0.33
NF1-203ENST00000422121 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
NF1-203ENST00000422121 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
NF1-203ENST00000422121 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
NF1-203ENST00000422121 NFIXQ14938 502 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
NF1-203ENST00000422121 ZPR1O75312 459 aa13□□□□□ -0.33
NF1-203ENST00000422121 CAMTA2O94983 1202 aa13□□□□□ -0.33
NF1-203ENST00000422121 ZNF853P0CG23 659 aa13□□□□□ -0.33
NF1-203ENST00000422121 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms