RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
LINC00271-201ENST00000421378 SOCS7O14512 581 aa22.66■■□□□ 1.22
LINC00271-201ENST00000421378 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
LINC00271-201ENST00000421378 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
LINC00271-201ENST00000421378 CYP19A1P11511 503 aaPredicted RBP22.65■■□□□ 1.22
LINC00271-201ENST00000421378 CNTNAP4Q9C0A0 1308 aa22.64■■□□□ 1.21
LINC00271-201ENST00000421378 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
LINC00271-201ENST00000421378 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
LINC00271-201ENST00000421378 HDGFL1Q5TGJ6 251 aa22.63■■□□□ 1.21
LINC00271-201ENST00000421378 NECTIN2Q92692 538 aa22.61■■□□□ 1.21
LINC00271-201ENST00000421378 AK7Q96M32 723 aa22.61■■□□□ 1.21
LINC00271-201ENST00000421378 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
LINC00271-201ENST00000421378 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
LINC00271-201ENST00000421378 VAMP4O75379 141 aa22.6■■□□□ 1.21
LINC00271-201ENST00000421378 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
LINC00271-201ENST00000421378 CHMP4AQ9BY43 222 aa22.6■■□□□ 1.21
LINC00271-201ENST00000421378 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
LINC00271-201ENST00000421378 ANO8Q9HCE9 1232 aaPredicted RBP22.59■■□□□ 1.21
LINC00271-201ENST00000421378 ZBTB1Q9Y2K1 713 aa22.59■■□□□ 1.21
LINC00271-201ENST00000421378 GNPATO15228 680 aa22.59■■□□□ 1.21
LINC00271-201ENST00000421378 A1BGP04217 495 aa22.59■■□□□ 1.21
LINC00271-201ENST00000421378 ZNF827Q17R98 1081 aa22.59■■□□□ 1.21
LINC00271-201ENST00000421378 AKT1S1Q96B36 256 aa22.59■■□□□ 1.21
LINC00271-201ENST00000421378 ERBB4Q15303 1308 aa22.58■■□□□ 1.21
LINC00271-201ENST00000421378 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.2
LINC00271-201ENST00000421378 NBPF14Q5TI25 921 aa22.58■■□□□ 1.2
LINC00271-201ENST00000421378 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.2
LINC00271-201ENST00000421378 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
LINC00271-201ENST00000421378 UBR3Q6ZT12 1888 aa22.57■■□□□ 1.2
LINC00271-201ENST00000421378 STK32BQ9NY57 414 aa22.57■■□□□ 1.2
LINC00271-201ENST00000421378 PIP4K2AP48426 406 aaPredicted RBP22.56■■□□□ 1.2
LINC00271-201ENST00000421378 TFCP2L1Q9NZI6 479 aa22.56■■□□□ 1.2
LINC00271-201ENST00000421378 CHPF2Q9P2E5 772 aa22.56■■□□□ 1.2
LINC00271-201ENST00000421378 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
LINC00271-201ENST00000421378 RTCBQ9Y3I0 505 aaKnown RBP22.56■■□□□ 1.2
LINC00271-201ENST00000421378 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 SLC15A2Q16348 729 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
LINC00271-201ENST00000421378 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 ZNF428Q96B54 188 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 RPS6KA4O75676 772 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 IL6STP40189 918 aaPredicted RBP22.55■■□□□ 1.2
LINC00271-201ENST00000421378 STK31Q9BXU1 1019 aa22.55■■□□□ 1.2
LINC00271-201ENST00000421378 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
LINC00271-201ENST00000421378 MYL6BP14649 208 aa22.54■■□□□ 1.2
LINC00271-201ENST00000421378 PDIA6Q15084 440 aa22.54■■□□□ 1.2
LINC00271-201ENST00000421378 DDX21Q9NR30 783 aaKnown RBP eCLIP22.54■■□□□ 1.2
LINC00271-201ENST00000421378 ZNF330Q9Y3S2 320 aaPredicted RBP22.54■■□□□ 1.2
LINC00271-201ENST00000421378 PROSER3Q2NL68 480 aa22.53■■□□□ 1.2
LINC00271-201ENST00000421378 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
LINC00271-201ENST00000421378 AMIGO3Q86WK7 504 aa22.53■■□□□ 1.2
LINC00271-201ENST00000421378 COL15A1P39059 1388 aa22.53■■□□□ 1.2
LINC00271-201ENST00000421378 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
LINC00271-201ENST00000421378 PHF14O94880 888 aa22.52■■□□□ 1.2
LINC00271-201ENST00000421378 ANXA1P04083 346 aa22.52■■□□□ 1.2
LINC00271-201ENST00000421378 SSFA2P28290 1259 aa22.52■■□□□ 1.2
LINC00271-201ENST00000421378 QSER1Q2KHR3 1735 aa22.52■■□□□ 1.19
LINC00271-201ENST00000421378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.51■■□□□ 1.19
LINC00271-201ENST00000421378 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
LINC00271-201ENST00000421378 ADRA2BP18089 450 aa22.5■■□□□ 1.19
LINC00271-201ENST00000421378 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
LINC00271-201ENST00000421378 SMIM5Q71RC9 77 aa22.5■■□□□ 1.19
LINC00271-201ENST00000421378 LRP10Q7Z4F1 713 aa22.5■■□□□ 1.19
LINC00271-201ENST00000421378 PNPLA7Q6ZV29 1317 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 SLC4A2P04920 1241 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 ALDH1L2Q3SY69 923 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 TRAPPC3LQ5T215 181 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 C4AP0C0L4 1744 aa22.49■■□□□ 1.19
LINC00271-201ENST00000421378 CACNA1FO60840 1977 aa22.48■■□□□ 1.19
LINC00271-201ENST00000421378 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
LINC00271-201ENST00000421378 BCL2L13Q9BXK5 485 aa22.48■■□□□ 1.19
LINC00271-201ENST00000421378 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
LINC00271-201ENST00000421378 ARHGEF1Q92888 912 aaKnown RBP22.47■■□□□ 1.19
LINC00271-201ENST00000421378 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
LINC00271-201ENST00000421378 A0A087WZG4 1122 aa22.46■■□□□ 1.19
LINC00271-201ENST00000421378 ARXQ96QS3 562 aa22.46■■□□□ 1.19
LINC00271-201ENST00000421378 RFC4P35249 363 aa22.46■■□□□ 1.19
LINC00271-201ENST00000421378 R3HDM1Q15032 1099 aaKnown RBP22.46■■□□□ 1.19
LINC00271-201ENST00000421378 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
LINC00271-201ENST00000421378 COPS6Q7L5N1 327 aa22.45■■□□□ 1.18
LINC00271-201ENST00000421378 DZIP3Q86Y13 1208 aaKnown RBP22.45■■□□□ 1.18
LINC00271-201ENST00000421378 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
LINC00271-201ENST00000421378 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
LINC00271-201ENST00000421378 PHAXQ9H814 394 aaKnown RBP22.45■■□□□ 1.18
LINC00271-201ENST00000421378 MSH5O43196 834 aa22.44■■□□□ 1.18
LINC00271-201ENST00000421378 KIF6Q6ZMV9 814 aa22.44■■□□□ 1.18
LINC00271-201ENST00000421378 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
LINC00271-201ENST00000421378 FLIIQ13045 1269 aa22.43■■□□□ 1.18
LINC00271-201ENST00000421378 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
LINC00271-201ENST00000421378 MRPL50Q8N5N7 158 aaKnown RBP22.43■■□□□ 1.18
LINC00271-201ENST00000421378 SCN7AQ01118 1682 aa22.43■■□□□ 1.18
LINC00271-201ENST00000421378 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
LINC00271-201ENST00000421378 ZPR1O75312 459 aa22.42■■□□□ 1.18
LINC00271-201ENST00000421378 NARFQ9UHQ1 456 aa22.42■■□□□ 1.18
LINC00271-201ENST00000421378 RCAN3Q9UKA8 241 aa22.42■■□□□ 1.18
LINC00271-201ENST00000421378 BCORQ6W2J9 1755 aa22.42■■□□□ 1.18
LINC00271-201ENST00000421378 PSDA5PKW4 1024 aaPredicted RBP22.42■■□□□ 1.18
LINC00271-201ENST00000421378 G2E3Q7L622 706 aa22.42■■□□□ 1.18
LINC00271-201ENST00000421378 BRPF1P55201 1214 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms