RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 LIG1P18858 919 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 PAF1Q8N7H5 531 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 MYZAPP0CAP1 466 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 IDH1O75874 414 aaKnown RBP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 HLTFQ14527 1009 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLCN4-203ENST00000421085 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
CLCN4-203ENST00000421085 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 ZKSCAN5Q9Y2L8 839 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC94Q9BW85 323 aaPredicted RBP14.31□□□□□ -0.12
CLCN4-203ENST00000421085 GTPBP4Q9BZE4 634 aaKnown RBP14.31□□□□□ -0.12
CLCN4-203ENST00000421085 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
CLCN4-203ENST00000421085 TRIM27P14373 513 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 MPHOSPH8Q99549 860 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 RSPH14Q9UHP6 348 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 CABP4P57796 275 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 UBE4AQ14139 1066 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 MAATS1Q7Z4T9 603 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
CLCN4-203ENST00000421085 ARHGAP5Q13017 1502 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 TXNDC2Q86VQ3 553 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 SPG7Q9UQ90 795 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 GSTTP1A0A1W2PQM5 241 aa14.3□□□□□ -0.12
CLCN4-203ENST00000421085 HMGB1P09429 215 aaKnown RBP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 NAA15Q9BXJ9 866 aaKnown RBP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC186Q7Z3E2 898 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 ALS2CR12Q96Q35 445 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 TSG101Q99816 390 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 SKILP12757 684 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLCN4-203ENST00000421085 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 IVLP07476 585 aa14.29□□□□□ -0.12
CLCN4-203ENST00000421085 MCM10Q7L590 875 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLCN4-203ENST00000421085 AFAP1Q8N556 730 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 ATF3P18847 181 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 NF2P35240 595 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 TTC12Q9H892 705 aaPredicted RBP14.28□□□□□ -0.12
CLCN4-203ENST00000421085 LRP2BPQ9P2M1 347 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 VPS36Q86VN1 386 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 CAVIN2O95810 425 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLCN4-203ENST00000421085 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
CLCN4-203ENST00000421085 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
CLCN4-203ENST00000421085 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.12
CLCN4-203ENST00000421085 ATP2C2O75185 946 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 ANO6Q4KMQ2 910 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 DNAI1Q9UI46 699 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 IGSF3O75054 1194 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 CETN2P41208 172 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 USP5P45974 858 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 TMX3Q96JJ7 454 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 C9orf84Q5VXU9 1444 aa14.27□□□□□ -0.12
CLCN4-203ENST00000421085 MCM6Q14566 821 aa14.27□□□□□ -0.13
CLCN4-203ENST00000421085 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
CLCN4-203ENST00000421085 CCDC85AQ96PX6 553 aaPredicted RBP14.27□□□□□ -0.13
CLCN4-203ENST00000421085 F6X3S4 739 aa14.27□□□□□ -0.13
CLCN4-203ENST00000421085 HSF2BPO75031 334 aa14.27□□□□□ -0.13
CLCN4-203ENST00000421085 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
CLCN4-203ENST00000421085 CNPY2Q9Y2B0 182 aa14.27□□□□□ -0.13
CLCN4-203ENST00000421085 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 SPECC1LQ69YQ0 1117 aa14.26□□□□□ -0.13
CLCN4-203ENST00000421085 USP48Q86UV5 1035 aa14.26□□□□□ -0.13
CLCN4-203ENST00000421085 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 DHX29Q7Z478 1369 aaKnown RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 ZNF76P36508 570 aa14.26□□□□□ -0.13
CLCN4-203ENST00000421085 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
CLCN4-203ENST00000421085 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
CLCN4-203ENST00000421085 GOLGA8BA8MQT2 603 aa14.25□□□□□ -0.13
CLCN4-203ENST00000421085 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
CLCN4-203ENST00000421085 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
CLCN4-203ENST00000421085 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
CLCN4-203ENST00000421085 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
CLCN4-203ENST00000421085 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
CLCN4-203ENST00000421085 MTIF2P46199 727 aaKnown RBP14.25□□□□□ -0.13
CLCN4-203ENST00000421085 SSRP1Q08945 709 aaKnown RBP14.25□□□□□ -0.13
CLCN4-203ENST00000421085 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
CLCN4-203ENST00000421085 UBASH3AP57075 661 aa14.25□□□□□ -0.13
CLCN4-203ENST00000421085 SLU7O95391 586 aaKnown RBP14.24□□□□□ -0.13
CLCN4-203ENST00000421085 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 ABCC11Q96J66 1382 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 HSPA4P34932 840 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 SRRTQ9BXP5 876 aaKnown RBP14.24□□□□□ -0.13
CLCN4-203ENST00000421085 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms