RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 RPS6KA4O75676 772 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
SCAP-205ENST00000420588 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 INTS5Q6P9B9 1019 aaKnown RBP17.91■□□□□ 0.46
SCAP-205ENST00000420588 C4BP0C0L5 1744 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 TAF1LQ8IZX4 1826 aa17.91■□□□□ 0.46
SCAP-205ENST00000420588 A1BGP04217 495 aa17.9■□□□□ 0.46
SCAP-205ENST00000420588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
SCAP-205ENST00000420588 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
SCAP-205ENST00000420588 SSFA2P28290 1259 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 KRT24Q2M2I5 525 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
SCAP-205ENST00000420588 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
SCAP-205ENST00000420588 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
SCAP-205ENST00000420588 ARXQ96QS3 562 aa17.88■□□□□ 0.45
SCAP-205ENST00000420588 TJP1Q07157 1748 aa17.88■□□□□ 0.45
SCAP-205ENST00000420588 E9PSI1 815 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 ADRA2BP18089 450 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 RFC4P35249 363 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
SCAP-205ENST00000420588 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
SCAP-205ENST00000420588 HOXB7P09629 217 aa17.86■□□□□ 0.45
SCAP-205ENST00000420588 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
SCAP-205ENST00000420588 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
SCAP-205ENST00000420588 ARHGEF1Q92888 912 aaKnown RBP17.86■□□□□ 0.45
SCAP-205ENST00000420588 PDGFDQ9GZP0 370 aaPredicted RBP17.86■□□□□ 0.45
SCAP-205ENST00000420588 A0A087WZG4 1122 aa17.85■□□□□ 0.45
SCAP-205ENST00000420588 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
SCAP-205ENST00000420588 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
SCAP-205ENST00000420588 HDGFL1Q5TGJ6 251 aa17.85■□□□□ 0.45
SCAP-205ENST00000420588 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
SCAP-205ENST00000420588 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
SCAP-205ENST00000420588 CICQ96RK0 1608 aaPredicted RBP17.84■□□□□ 0.45
SCAP-205ENST00000420588 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
SCAP-205ENST00000420588 ZPR1O75312 459 aa17.84■□□□□ 0.45
SCAP-205ENST00000420588 ZBTB7AO95365 584 aa17.84■□□□□ 0.45
SCAP-205ENST00000420588 MYL6BP14649 208 aa17.84■□□□□ 0.45
SCAP-205ENST00000420588 EXOSC9Q06265 439 aaKnown RBP17.84■□□□□ 0.45
SCAP-205ENST00000420588 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
SCAP-205ENST00000420588 TWISTNBQ3B726 338 aaPredicted RBP17.84■□□□□ 0.45
SCAP-205ENST00000420588 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
SCAP-205ENST00000420588 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
SCAP-205ENST00000420588 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.44
SCAP-205ENST00000420588 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
SCAP-205ENST00000420588 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
SCAP-205ENST00000420588 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
SCAP-205ENST00000420588 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
SCAP-205ENST00000420588 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
SCAP-205ENST00000420588 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
SCAP-205ENST00000420588 COL15A1P39059 1388 aa17.81■□□□□ 0.44
SCAP-205ENST00000420588 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
SCAP-205ENST00000420588 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
SCAP-205ENST00000420588 SPON1Q9HCB6 807 aa17.81■□□□□ 0.44
SCAP-205ENST00000420588 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
SCAP-205ENST00000420588 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
SCAP-205ENST00000420588 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
SCAP-205ENST00000420588 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAP-205ENST00000420588 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
SCAP-205ENST00000420588 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 ANXA1P04083 346 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
SCAP-205ENST00000420588 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
SCAP-205ENST00000420588 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 TUBGCP6Q96RT7 1819 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 VAMP4O75379 141 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
SCAP-205ENST00000420588 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
SCAP-205ENST00000420588 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
SCAP-205ENST00000420588 POLD1P28340 1107 aa17.77■□□□□ 0.44
SCAP-205ENST00000420588 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
SCAP-205ENST00000420588 PDIA6Q15084 440 aa17.77■□□□□ 0.44
SCAP-205ENST00000420588 PROSER3Q2NL68 480 aa17.77■□□□□ 0.44
SCAP-205ENST00000420588 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
SCAP-205ENST00000420588 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
SCAP-205ENST00000420588 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
SCAP-205ENST00000420588 GYS1P13807 737 aa17.76■□□□□ 0.43
SCAP-205ENST00000420588 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
SCAP-205ENST00000420588 XAGE3Q8WTP9 111 aa17.75■□□□□ 0.43
SCAP-205ENST00000420588 CASZ1Q86V15 1759 aa17.74■□□□□ 0.43
SCAP-205ENST00000420588 FKBP8Q14318 412 aa17.74■□□□□ 0.43
SCAP-205ENST00000420588 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
SCAP-205ENST00000420588 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SCAP-205ENST00000420588 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
SCAP-205ENST00000420588 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
SCAP-205ENST00000420588 ZBTB3Q9H5J0 574 aa17.73■□□□□ 0.43
SCAP-205ENST00000420588 PPP1R1BQ9UD71 204 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms