RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
CTSA-205ENST00000419493 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
CTSA-205ENST00000419493 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
CTSA-205ENST00000419493 TJP1Q07157 1748 aa12.76□□□□□ -0.37
CTSA-205ENST00000419493 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
CTSA-205ENST00000419493 RIPK4P57078 832 aa12.75□□□□□ -0.37
CTSA-205ENST00000419493 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
CTSA-205ENST00000419493 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
CTSA-205ENST00000419493 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
CTSA-205ENST00000419493 WWC3Q9ULE0 1092 aa12.75□□□□□ -0.37
CTSA-205ENST00000419493 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
CTSA-205ENST00000419493 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
CTSA-205ENST00000419493 A1BGP04217 495 aa12.74□□□□□ -0.37
CTSA-205ENST00000419493 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
CTSA-205ENST00000419493 FKBP8Q14318 412 aa12.74□□□□□ -0.37
CTSA-205ENST00000419493 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
CTSA-205ENST00000419493 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
CTSA-205ENST00000419493 COL15A1P39059 1388 aa12.73□□□□□ -0.37
CTSA-205ENST00000419493 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
CTSA-205ENST00000419493 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
CTSA-205ENST00000419493 A0A087WZG4 1122 aa12.72□□□□□ -0.37
CTSA-205ENST00000419493 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
CTSA-205ENST00000419493 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
CTSA-205ENST00000419493 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
CTSA-205ENST00000419493 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
CTSA-205ENST00000419493 CICQ96RK0 1608 aaPredicted RBP12.71□□□□□ -0.37
CTSA-205ENST00000419493 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
CTSA-205ENST00000419493 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
CTSA-205ENST00000419493 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
CTSA-205ENST00000419493 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
CTSA-205ENST00000419493 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
CTSA-205ENST00000419493 BICDL1Q6ZP65 573 aa12.71□□□□□ -0.37
CTSA-205ENST00000419493 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
CTSA-205ENST00000419493 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
CTSA-205ENST00000419493 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.38
CTSA-205ENST00000419493 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTSA-205ENST00000419493 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
CTSA-205ENST00000419493 C4AP0C0L4 1744 aa12.7□□□□□ -0.38
CTSA-205ENST00000419493 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
CTSA-205ENST00000419493 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
CTSA-205ENST00000419493 ANP32CO43423 234 aa12.69□□□□□ -0.38
CTSA-205ENST00000419493 TM4SF1P30408 202 aa12.69□□□□□ -0.38
CTSA-205ENST00000419493 TGFB2P61812 414 aa12.69□□□□□ -0.38
CTSA-205ENST00000419493 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
CTSA-205ENST00000419493 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
CTSA-205ENST00000419493 NPHP1O15259 732 aa12.68□□□□□ -0.38
CTSA-205ENST00000419493 DDR1Q08345 913 aa12.68□□□□□ -0.38
CTSA-205ENST00000419493 NFIXQ14938 502 aa12.68□□□□□ -0.38
CTSA-205ENST00000419493 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
CTSA-205ENST00000419493 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CTSA-205ENST00000419493 SERPINB2P05120 415 aa12.67□□□□□ -0.38
CTSA-205ENST00000419493 DPEP1P16444 411 aa12.67□□□□□ -0.38
CTSA-205ENST00000419493 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
CTSA-205ENST00000419493 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
CTSA-205ENST00000419493 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
CTSA-205ENST00000419493 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
CTSA-205ENST00000419493 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
CTSA-205ENST00000419493 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
CTSA-205ENST00000419493 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
CTSA-205ENST00000419493 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
CTSA-205ENST00000419493 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 APAF1O14727 1248 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 MYL6BP14649 208 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
CTSA-205ENST00000419493 CHRNA5P30532 468 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 CHD4Q14839 1912 aa12.64□□□□□ -0.39
CTSA-205ENST00000419493 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 CCDC184Q52MB2 194 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 NBPF10Q6P3W6 841 aaKnown RBP12.63□□□□□ -0.39
CTSA-205ENST00000419493 NBPF15Q8N660 670 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 MRS2Q9HD23 443 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 PXDNLA1KZ92 1463 aa12.63□□□□□ -0.39
CTSA-205ENST00000419493 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
CTSA-205ENST00000419493 DALRD3Q5D0E6 543 aaKnown RBP12.62□□□□□ -0.39
CTSA-205ENST00000419493 ARHGAP27Q6ZUM4 889 aa12.62□□□□□ -0.39
CTSA-205ENST00000419493 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
CTSA-205ENST00000419493 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
CTSA-205ENST00000419493 FAM177BA6PVY3 158 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 KCNA3P22001 575 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 NECTIN2Q92692 538 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTSA-205ENST00000419493 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
CTSA-205ENST00000419493 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 H0YIN7 160 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 CHL1O00533 1208 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 GTF2E1P29083 439 aaPredicted RBP12.6□□□□□ -0.39
CTSA-205ENST00000419493 ST5P78524 1137 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 NBPF5PQ86XG9 351 aaPredicted RBP12.6□□□□□ -0.39
CTSA-205ENST00000419493 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
CTSA-205ENST00000419493 PDE6BP35913 854 aa12.59□□□□□ -0.39
CTSA-205ENST00000419493 CALD1Q05682 793 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms