RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 ATP8B2P98198 1209 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 CNTROBQ8N137 903 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 PDRG1Q9NUG6 133 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 SYT1P21579 422 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
TNFRSF8-203ENST00000417814 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 FAM135BQ49AJ0 1406 aa15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 TPM2P07951 284 aa15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 G3BP1Q13283 466 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 GLI2P10070 1586 aa15.83■□□□□ 0.12
TNFRSF8-203ENST00000417814 STX6O43752 255 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 MBD3O95983 291 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 C1orf141Q5JVX7 400 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 CCDC39Q9UFE4 941 aa15.82■□□□□ 0.12
TNFRSF8-203ENST00000417814 PTPRCP08575 1304 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 CHMP4CQ96CF2 233 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 H3BQV1 296 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 IFFO2Q5TF58 517 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 SNX14Q9Y5W7 946 aa15.81■□□□□ 0.12
TNFRSF8-203ENST00000417814 LAMC1P11047 1609 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 ISM2Q6H9L7 571 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 ZKSCAN5Q9Y2L8 839 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 ADGRB1O14514 1584 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 OFD1O75665 1012 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 V9GYY5 206 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF8-203ENST00000417814 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 TLR7Q9NYK1 1049 aaKnown RBP15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 LUZP1Q86V48 1076 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 ROBO2Q9HCK4 1378 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 KCNA6P17658 529 aa15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 PUS7Q96PZ0 661 aaKnown RBP15.79■□□□□ 0.12
TNFRSF8-203ENST00000417814 TAF6LQ9Y6J9 622 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 BRD1O95696 1058 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 ZNF445P59923 1031 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 FILIP1Q7Z7B0 1213 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 C16orf45Q96MC5 204 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF8-203ENST00000417814 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 SEC62Q99442 399 aaKnown RBP15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 LIMCH1Q9UPQ0 1083 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 CAMSAP1Q5T5Y3 1602 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 DDX46Q7L014 1031 aaKnown RBP15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 SNRKQ9NRH2 765 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 ABCC3O15438 1527 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
TNFRSF8-203ENST00000417814 PNPLA6Q8IY17 1366 aa15.77■□□□□ 0.11
TNFRSF8-203ENST00000417814 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 PHF14O94880 888 aa15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 PPP1R9BQ96SB3 815 aa15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 TRMT1Q9NXH9 659 aaKnown RBP15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 RBM8AQ9Y5S9 174 aaKnown RBP15.76■□□□□ 0.11
TNFRSF8-203ENST00000417814 HOXC9P31274 260 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 NMIQ13287 307 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 MYD88Q99836 296 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 NOL7Q9UMY1 257 aaKnown RBP15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 ADGRB3O60242 1522 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 CPS1P31327 1500 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 JAK2O60674 1132 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 LRMPQ12912 555 aa15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF8-203ENST00000417814 PIK3R4Q99570 1358 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 GPATCH3Q96I76 525 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 FTOQ9C0B1 505 aaKnown RBP eCLIP15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 HAND2P61296 217 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 DACT1Q9NYF0 836 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 PTGS1P23219 599 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 PTPN21Q16825 1174 aa15.74■□□□□ 0.11
TNFRSF8-203ENST00000417814 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 LIG1P18858 919 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 ME3Q16798 604 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 PTPRMP28827 1452 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
TNFRSF8-203ENST00000417814 CHAF1AQ13111 956 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms