RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
YIPF3-203ENST00000416380 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
YIPF3-203ENST00000416380 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
YIPF3-203ENST00000416380 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
YIPF3-203ENST00000416380 RPS6KA4O75676 772 aa16.64■□□□□ 0.25
YIPF3-203ENST00000416380 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
YIPF3-203ENST00000416380 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
YIPF3-203ENST00000416380 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.25
YIPF3-203ENST00000416380 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-203ENST00000416380 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
YIPF3-203ENST00000416380 CCDC87Q9NVE4 849 aa16.63■□□□□ 0.25
YIPF3-203ENST00000416380 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-203ENST00000416380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
YIPF3-203ENST00000416380 A1BGP04217 495 aa16.62■□□□□ 0.25
YIPF3-203ENST00000416380 SSFA2P28290 1259 aa16.62■□□□□ 0.25
YIPF3-203ENST00000416380 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
YIPF3-203ENST00000416380 GNAI1P63096 354 aa16.62■□□□□ 0.25
YIPF3-203ENST00000416380 PDIA6Q15084 440 aa16.62■□□□□ 0.25
YIPF3-203ENST00000416380 TRMT2AQ8IZ69 625 aaKnown RBP16.62■□□□□ 0.25
YIPF3-203ENST00000416380 TEX13AQ9BXU3 409 aaPredicted RBP16.62■□□□□ 0.25
YIPF3-203ENST00000416380 GNPATO15228 680 aa16.61■□□□□ 0.25
YIPF3-203ENST00000416380 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
YIPF3-203ENST00000416380 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
YIPF3-203ENST00000416380 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
YIPF3-203ENST00000416380 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
YIPF3-203ENST00000416380 PTGER2P43116 358 aa16.6■□□□□ 0.25
YIPF3-203ENST00000416380 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
YIPF3-203ENST00000416380 AK7Q96M32 723 aa16.6■□□□□ 0.25
YIPF3-203ENST00000416380 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
YIPF3-203ENST00000416380 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
YIPF3-203ENST00000416380 FANCIQ9NVI1 1328 aa16.59■□□□□ 0.25
YIPF3-203ENST00000416380 STARD3NLO95772 234 aa16.58■□□□□ 0.24
YIPF3-203ENST00000416380 ADRA2BP18089 450 aa16.58■□□□□ 0.24
YIPF3-203ENST00000416380 HMGB2P26583 209 aaKnown RBP16.58■□□□□ 0.24
YIPF3-203ENST00000416380 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
YIPF3-203ENST00000416380 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
YIPF3-203ENST00000416380 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.24
YIPF3-203ENST00000416380 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
YIPF3-203ENST00000416380 HOXB7P09629 217 aa16.57■□□□□ 0.24
YIPF3-203ENST00000416380 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-203ENST00000416380 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
YIPF3-203ENST00000416380 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
YIPF3-203ENST00000416380 RTCBQ9Y3I0 505 aaKnown RBP16.57■□□□□ 0.24
YIPF3-203ENST00000416380 SLFN5Q08AF3 891 aa16.56■□□□□ 0.24
YIPF3-203ENST00000416380 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
YIPF3-203ENST00000416380 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
YIPF3-203ENST00000416380 COL15A1P39059 1388 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
YIPF3-203ENST00000416380 PHF14O94880 888 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 ZBTB7AO95365 584 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 GYS1P13807 737 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
YIPF3-203ENST00000416380 TRAPPC3LQ5T215 181 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
YIPF3-203ENST00000416380 LRP5O75197 1615 aa16.55■□□□□ 0.24
YIPF3-203ENST00000416380 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
YIPF3-203ENST00000416380 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
YIPF3-203ENST00000416380 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
YIPF3-203ENST00000416380 NARFQ9UHQ1 456 aa16.53■□□□□ 0.24
YIPF3-203ENST00000416380 VAMP4O75379 141 aa16.52■□□□□ 0.24
YIPF3-203ENST00000416380 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
YIPF3-203ENST00000416380 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-203ENST00000416380 ANXA1P04083 346 aa16.51■□□□□ 0.23
YIPF3-203ENST00000416380 TM4SF1P30408 202 aa16.51■□□□□ 0.23
YIPF3-203ENST00000416380 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
YIPF3-203ENST00000416380 FKBP8Q14318 412 aa16.51■□□□□ 0.23
YIPF3-203ENST00000416380 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
YIPF3-203ENST00000416380 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
YIPF3-203ENST00000416380 E9PSI1 815 aa16.5■□□□□ 0.23
YIPF3-203ENST00000416380 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
YIPF3-203ENST00000416380 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
YIPF3-203ENST00000416380 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
YIPF3-203ENST00000416380 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
YIPF3-203ENST00000416380 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
YIPF3-203ENST00000416380 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
YIPF3-203ENST00000416380 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
YIPF3-203ENST00000416380 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
YIPF3-203ENST00000416380 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
YIPF3-203ENST00000416380 RFC4P35249 363 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
YIPF3-203ENST00000416380 DDR1Q08345 913 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
YIPF3-203ENST00000416380 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 SPON1Q9HCB6 807 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 UTRNP46939 3433 aa16.48■□□□□ 0.23
YIPF3-203ENST00000416380 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
YIPF3-203ENST00000416380 RGL2O15211 777 aa16.47■□□□□ 0.23
YIPF3-203ENST00000416380 HLFQ16534 295 aa16.47■□□□□ 0.23
YIPF3-203ENST00000416380 A0A087WZG4 1122 aa16.46■□□□□ 0.23
YIPF3-203ENST00000416380 MYL6BP14649 208 aa16.46■□□□□ 0.23
YIPF3-203ENST00000416380 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
YIPF3-203ENST00000416380 MSH5O43196 834 aa16.45■□□□□ 0.22
YIPF3-203ENST00000416380 NFIXQ14938 502 aa16.45■□□□□ 0.22
YIPF3-203ENST00000416380 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
YIPF3-203ENST00000416380 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
YIPF3-203ENST00000416380 ERVV-1B6SEH8 477 aa16.44■□□□□ 0.22
YIPF3-203ENST00000416380 POLRMTO00411 1230 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms