RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PRICKLE2Q7Z3G6 844 aa7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 COL26A1Q96A83 441 aa7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 PRIMPOLQ96LW4 560 aa7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 C2orf49Q9BVC5 232 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 SERTM1A2A2V5 107 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 EML1O00423 815 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 PPP1R12BO60237 982 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 NOS2P35228 1153 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 TBCELQ5QJ74 424 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 PHLDB3Q6NSJ2 640 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 CHMP3Q9Y3E7 222 aa7.19□□□□□ -1.26
HMGB1P11-201ENST00000413899 C11orf95C9JLR9 678 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 LGR5O75473 907 aa7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 BRD1O95696 1058 aa7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 FKBP5Q13451 457 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 L3MBTL2Q969R5 705 aa7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 ZDHHC3Q9NYG2 299 aa7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 DYRK1BQ9Y463 629 aa7.18□□□□□ -1.26
HMGB1P11-201ENST00000413899 A0A1B0GTH6 734 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 SOBPA7XYQ1 873 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 POTECB2RU33 542 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 RHOQP17081 205 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 PLA2G4AP47712 749 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 C1orf53Q5VUE5 145 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 TIMMDC1Q9NPL8 285 aa7.17□□□□□ -1.26
HMGB1P11-201ENST00000413899 SENP3-EIF4A1A0A087X0R7 540 aa7.16□□□□□ -1.26
HMGB1P11-201ENST00000413899 SLC35F4A4IF30 521 aa7.16□□□□□ -1.26
HMGB1P11-201ENST00000413899 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
HMGB1P11-201ENST00000413899 PTSQ03393 145 aa7.16□□□□□ -1.26
HMGB1P11-201ENST00000413899 NBPF1Q3BBV0 1214 aa7.16□□□□□ -1.26
HMGB1P11-201ENST00000413899 PHKA2P46019 1235 aa7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 SH3PXD2AQ5TCZ1 1133 aa7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 CHMP7Q8WUX9 453 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 ZNF232Q9UNY5 417 aa7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 GPC6Q9Y625 555 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 PARP3Q9Y6F1 533 aa7.15□□□□□ -1.26
HMGB1P11-201ENST00000413899 F11P03951 625 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 ATP4AP20648 1035 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 MSX1P28360 303 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 C7orf43Q8WVR3 580 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 VTI1AQ96AJ9 217 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 MYO19Q96H55 970 aa7.14□□□□□ -1.27
HMGB1P11-201ENST00000413899 TATP17735 454 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 TXLNAP40222 546 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 KCNA1Q09470 495 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 TXNDC2Q86VQ3 553 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 ALDH16A1Q8IZ83 802 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 CCDC155Q8N6L0 562 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 PHACTR1Q9C0D0 580 aa7.13□□□□□ -1.27
HMGB1P11-201ENST00000413899 PATL2C9JE40 543 aaKnown RBP7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 ARID4AP29374 1257 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 RTN1Q16799 776 aa7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 ZNF787Q6DD87 383 aa7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 CRISPLD1Q9H336 500 aa7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 QTRT2Q9H974 415 aaKnown RBP7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 HCN4Q9Y3Q4 1203 aa7.12□□□□□ -1.27
HMGB1P11-201ENST00000413899 LBRQ14739 615 aaKnown RBP7.11□□□□□ -1.27
HMGB1P11-201ENST00000413899 CAPN12Q6ZSI9 719 aa7.11□□□□□ -1.27
HMGB1P11-201ENST00000413899 AIDAQ96BJ3 306 aa7.11□□□□□ -1.27
HMGB1P11-201ENST00000413899 C16orf46Q6P387 395 aa7.1□□□□□ -1.27
HMGB1P11-201ENST00000413899 NPAS3Q8IXF0 933 aa7.1□□□□□ -1.27
HMGB1P11-201ENST00000413899 GMCL1Q96IK5 515 aa7.1□□□□□ -1.27
HMGB1P11-201ENST00000413899 ZIC5Q96T25 663 aa7.1□□□□□ -1.27
HMGB1P11-201ENST00000413899 MKNK1Q9BUB5 465 aa7.1□□□□□ -1.27
HMGB1P11-201ENST00000413899 PPFIA3O75145 1194 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 ITGA6P23229 1130 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 SCNN1AP37088 669 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 HIF1AQ16665 826 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 COX20Q5RI15 118 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 NLRP8Q86W28 1048 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 TRIM22Q8IYM9 498 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 NGLY1Q96IV0 654 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 SEPT3Q9UH03 358 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 EGFL7Q9UHF1 273 aa7.09□□□□□ -1.27
HMGB1P11-201ENST00000413899 H7C1W4 665 aa7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 PGBD3Q8N328 593 aa7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 NANOS1Q8WY41 292 aaKnown RBP7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 GAS2L1Q99501 681 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 SAP130Q9H0E3 1048 aa7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 CUEDC1Q9NWM3 386 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
HMGB1P11-201ENST00000413899 A0A1W2PNR3 127 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 TNFRSF10BO14763 440 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 THBS1P07996 1170 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 ARSJQ5FYB0 599 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 SAMD5Q5TGI4 173 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 IER5Q5VY09 327 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms