RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 AK7Q96M32 723 aa17.04■□□□□ 0.32
SF1-206ENST00000413725 HOXB7P09629 217 aa17.03■□□□□ 0.32
SF1-206ENST00000413725 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
SF1-206ENST00000413725 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
SF1-206ENST00000413725 RC3H1Q5TC82 1133 aaKnown RBP17.03■□□□□ 0.32
SF1-206ENST00000413725 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
SF1-206ENST00000413725 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
SF1-206ENST00000413725 C4AP0C0L4 1744 aa17.02■□□□□ 0.32
SF1-206ENST00000413725 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
SF1-206ENST00000413725 AKT1S1Q96B36 256 aa17.02■□□□□ 0.32
SF1-206ENST00000413725 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
SF1-206ENST00000413725 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
SF1-206ENST00000413725 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 SLC15A2Q16348 729 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
SF1-206ENST00000413725 GNPATO15228 680 aa17■□□□□ 0.31
SF1-206ENST00000413725 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
SF1-206ENST00000413725 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
SF1-206ENST00000413725 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
SF1-206ENST00000413725 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
SF1-206ENST00000413725 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
SF1-206ENST00000413725 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
SF1-206ENST00000413725 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
SF1-206ENST00000413725 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
SF1-206ENST00000413725 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
SF1-206ENST00000413725 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
SF1-206ENST00000413725 A1BGP04217 495 aa16.97■□□□□ 0.31
SF1-206ENST00000413725 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
SF1-206ENST00000413725 SSFA2P28290 1259 aa16.97■□□□□ 0.31
SF1-206ENST00000413725 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
SF1-206ENST00000413725 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
SF1-206ENST00000413725 PHF14O94880 888 aa16.96■□□□□ 0.31
SF1-206ENST00000413725 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.31
SF1-206ENST00000413725 BCORQ6W2J9 1755 aa16.96■□□□□ 0.31
SF1-206ENST00000413725 COL15A1P39059 1388 aa16.95■□□□□ 0.3
SF1-206ENST00000413725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
SF1-206ENST00000413725 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
SF1-206ENST00000413725 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
SF1-206ENST00000413725 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
SF1-206ENST00000413725 NUP98P52948 1817 aa16.95■□□□□ 0.3
SF1-206ENST00000413725 PNPLA7Q6ZV29 1317 aa16.95■□□□□ 0.3
SF1-206ENST00000413725 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
SF1-206ENST00000413725 TRAPPC3LQ5T215 181 aa16.94■□□□□ 0.3
SF1-206ENST00000413725 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
SF1-206ENST00000413725 A0A087WZG4 1122 aa16.93■□□□□ 0.3
SF1-206ENST00000413725 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
SF1-206ENST00000413725 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
SF1-206ENST00000413725 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
SF1-206ENST00000413725 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
SF1-206ENST00000413725 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
SF1-206ENST00000413725 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
SF1-206ENST00000413725 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 VAMP4O75379 141 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
SF1-206ENST00000413725 MYL6BP14649 208 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 RFC4P35249 363 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
SF1-206ENST00000413725 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
SF1-206ENST00000413725 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
SF1-206ENST00000413725 ANKRD36CQ5JPF3 1778 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 PDIA6Q15084 440 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 SMIM5Q71RC9 77 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
SF1-206ENST00000413725 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 ARXQ96QS3 562 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
SF1-206ENST00000413725 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.3
SF1-206ENST00000413725 ZPR1O75312 459 aa16.89■□□□□ 0.29
SF1-206ENST00000413725 ANXA1P04083 346 aa16.89■□□□□ 0.29
SF1-206ENST00000413725 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
SF1-206ENST00000413725 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
SF1-206ENST00000413725 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
SF1-206ENST00000413725 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
SF1-206ENST00000413725 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
SF1-206ENST00000413725 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
SF1-206ENST00000413725 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
SF1-206ENST00000413725 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
SF1-206ENST00000413725 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
SF1-206ENST00000413725 LRP10Q7Z4F1 713 aa16.86■□□□□ 0.29
SF1-206ENST00000413725 PDGFDQ9GZP0 370 aaPredicted RBP16.86■□□□□ 0.29
SF1-206ENST00000413725 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
SF1-206ENST00000413725 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
SF1-206ENST00000413725 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
SF1-206ENST00000413725 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
SF1-206ENST00000413725 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
SF1-206ENST00000413725 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms