RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MYRIPQ8NFW9 859 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 PRIMPOLQ96LW4 560 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 TTC14Q96N46 770 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 GDPD2Q9HCC8 539 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
SDCBP-202ENST00000413219 SGSM2O43147 1006 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 UBTFL1P0CB47 393 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-202ENST00000413219 UBE2HP62256 183 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 USP44Q9H0E7 712 aa21.24■□□□□ 0.99
SDCBP-202ENST00000413219 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-202ENST00000413219 ATP6V1DQ9Y5K8 247 aa21.23■□□□□ 0.99
SDCBP-202ENST00000413219 POLA2Q14181 598 aa21.22■□□□□ 0.99
SDCBP-202ENST00000413219 SNX14Q9Y5W7 946 aa21.22■□□□□ 0.99
SDCBP-202ENST00000413219 HMGN5P82970 282 aaKnown RBP21.22■□□□□ 0.99
SDCBP-202ENST00000413219 IL25Q9H293 177 aa21.22■□□□□ 0.99
SDCBP-202ENST00000413219 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
SDCBP-202ENST00000413219 CEP170BQ9Y4F5 1589 aaPredicted RBP21.21■□□□□ 0.99
SDCBP-202ENST00000413219 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
SDCBP-202ENST00000413219 EYA1Q99502 592 aa21.21■□□□□ 0.99
SDCBP-202ENST00000413219 LIMCH1Q9UPQ0 1083 aa21.21■□□□□ 0.99
SDCBP-202ENST00000413219 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.99
SDCBP-202ENST00000413219 ADAMTS13Q76LX8 1427 aa21.2■□□□□ 0.99
SDCBP-202ENST00000413219 LSG1Q9H089 658 aaKnown RBP21.2■□□□□ 0.99
SDCBP-202ENST00000413219 STX6O43752 255 aa21.2■□□□□ 0.98
SDCBP-202ENST00000413219 USP25Q9UHP3 1055 aa21.2■□□□□ 0.98
SDCBP-202ENST00000413219 CNPY2Q9Y2B0 182 aa21.2■□□□□ 0.98
SDCBP-202ENST00000413219 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
SDCBP-202ENST00000413219 FOXD4L6Q3SYB3 417 aaPredicted RBP21.19■□□□□ 0.98
SDCBP-202ENST00000413219 FOXD4L3Q6VB84 417 aaPredicted RBP21.19■□□□□ 0.98
SDCBP-202ENST00000413219 IL1RAPL2Q9NP60 686 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 ADCY5O95622 1261 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 F13A1P00488 732 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 GTF2F1P35269 517 aaKnown RBP eCLIP21.19■□□□□ 0.98
SDCBP-202ENST00000413219 NOLC1Q14978 699 aaKnown RBP eCLIP21.19■□□□□ 0.98
SDCBP-202ENST00000413219 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 SPTLC3Q9NUV7 552 aa21.19■□□□□ 0.98
SDCBP-202ENST00000413219 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
SDCBP-202ENST00000413219 CRYBG1Q9Y4K1 1723 aa21.18■□□□□ 0.98
SDCBP-202ENST00000413219 SYT1P21579 422 aa21.18■□□□□ 0.98
SDCBP-202ENST00000413219 NUTM1Q86Y26 1132 aa21.18■□□□□ 0.98
SDCBP-202ENST00000413219 RHPN1Q8TCX5 695 aa21.18■□□□□ 0.98
SDCBP-202ENST00000413219 AK2P54819 239 aa21.17■□□□□ 0.98
SDCBP-202ENST00000413219 SMC3Q9UQE7 1217 aa21.17■□□□□ 0.98
SDCBP-202ENST00000413219 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
SDCBP-202ENST00000413219 KDM4AO75164 1064 aa21.17■□□□□ 0.98
SDCBP-202ENST00000413219 RUFY3Q7L099 469 aa21.17■□□□□ 0.98
SDCBP-202ENST00000413219 SURF6O75683 361 aaKnown RBP21.16■□□□□ 0.98
SDCBP-202ENST00000413219 AMPHP49418 695 aa21.16■□□□□ 0.98
SDCBP-202ENST00000413219 TAF7Q15545 349 aaPredicted RBP21.16■□□□□ 0.98
SDCBP-202ENST00000413219 DNTTIP2Q5QJE6 756 aaKnown RBP21.16■□□□□ 0.98
SDCBP-202ENST00000413219 PPP1R42Q7Z4L9 355 aa21.16■□□□□ 0.98
SDCBP-202ENST00000413219 SMAP1Q8IYB5 467 aaPredicted RBP21.16■□□□□ 0.98
SDCBP-202ENST00000413219 FUCA2Q9BTY2 467 aa21.16■□□□□ 0.98
SDCBP-202ENST00000413219 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
SDCBP-202ENST00000413219 HSP90AB4PQ58FF6 505 aa21.16■□□□□ 0.98
SDCBP-202ENST00000413219 TNRQ92752 1358 aa21.16■□□□□ 0.98
SDCBP-202ENST00000413219 SOX12O15370 315 aa21.15■□□□□ 0.98
SDCBP-202ENST00000413219 TPM3P06753 285 aa21.15■□□□□ 0.98
SDCBP-202ENST00000413219 DIP2BQ9P265 1576 aa21.15■□□□□ 0.98
SDCBP-202ENST00000413219 RASEFQ8IZ41 740 aa21.14■□□□□ 0.98
SDCBP-202ENST00000413219 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.98
SDCBP-202ENST00000413219 TCHHQ07283 1943 aa21.14■□□□□ 0.98
SDCBP-202ENST00000413219 UBR1Q8IWV7 1749 aa21.14■□□□□ 0.97
SDCBP-202ENST00000413219 PLEKHG1Q9ULL1 1385 aa21.14■□□□□ 0.97
SDCBP-202ENST00000413219 TTC41PQ6P2S7 1318 aa21.14■□□□□ 0.97
SDCBP-202ENST00000413219 MLECQ14165 292 aa21.14■□□□□ 0.97
SDCBP-202ENST00000413219 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
SDCBP-202ENST00000413219 CCDC94Q9BW85 323 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-202ENST00000413219 TM6SF1Q9BZW5 370 aa21.13■□□□□ 0.97
SDCBP-202ENST00000413219 SH2B1Q9NRF2 756 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-202ENST00000413219 PDIA4P13667 645 aaKnown RBP21.13■□□□□ 0.97
SDCBP-202ENST00000413219 VPS53Q5VIR6 699 aa21.13■□□□□ 0.97
SDCBP-202ENST00000413219 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
SDCBP-202ENST00000413219 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
SDCBP-202ENST00000413219 FAM69CQ0P6D2 419 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 KCNB2Q92953 911 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 CHMP4AQ9BY43 222 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 ESF1Q9H501 851 aaKnown RBP21.12■□□□□ 0.97
SDCBP-202ENST00000413219 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 NWD1Q149M9 1564 aa21.12■□□□□ 0.97
SDCBP-202ENST00000413219 GLRX3O76003 335 aaKnown RBP21.11■□□□□ 0.97
SDCBP-202ENST00000413219 MAP4K4O95819 1239 aaPredicted RBP21.11■□□□□ 0.97
SDCBP-202ENST00000413219 TTC12Q9H892 705 aaPredicted RBP21.11■□□□□ 0.97
SDCBP-202ENST00000413219 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
SDCBP-202ENST00000413219 SRGAP3O43295 1099 aa21.11■□□□□ 0.97
SDCBP-202ENST00000413219 ZNF830Q96NB3 372 aaPredicted RBP21.11■□□□□ 0.97
SDCBP-202ENST00000413219 MTMR6Q9Y217 621 aa21.11■□□□□ 0.97
SDCBP-202ENST00000413219 FIBPO43427 364 aa21.1■□□□□ 0.97
SDCBP-202ENST00000413219 CASTP20810 708 aaKnown RBP21.09■□□□□ 0.97
SDCBP-202ENST00000413219 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
SDCBP-202ENST00000413219 HOXB7P09629 217 aa21.09■□□□□ 0.97
SDCBP-202ENST00000413219 ZSWIM6Q9HCJ5 1215 aa21.09■□□□□ 0.97
SDCBP-202ENST00000413219 GJB2P29033 226 aa21.08■□□□□ 0.97
SDCBP-202ENST00000413219 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
SDCBP-202ENST00000413219 PHAXQ9H814 394 aaKnown RBP21.08■□□□□ 0.97
SDCBP-202ENST00000413219 DIAPH3Q9NSV4 1193 aa21.08■□□□□ 0.97
SDCBP-202ENST00000413219 PRDM4Q9UKN5 801 aa21.08■□□□□ 0.97
SDCBP-202ENST00000413219 PDRG1Q9NUG6 133 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms