RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
ZNF3-204ENST00000412947 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
ZNF3-204ENST00000412947 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
ZNF3-204ENST00000412947 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
ZNF3-204ENST00000412947 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
ZNF3-204ENST00000412947 E9PSI1 815 aa16.4■□□□□ 0.22
ZNF3-204ENST00000412947 HOXB7P09629 217 aa16.4■□□□□ 0.22
ZNF3-204ENST00000412947 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
ZNF3-204ENST00000412947 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
ZNF3-204ENST00000412947 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
ZNF3-204ENST00000412947 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
ZNF3-204ENST00000412947 PHF14O94880 888 aa16.39■□□□□ 0.21
ZNF3-204ENST00000412947 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
ZNF3-204ENST00000412947 SSFA2P28290 1259 aa16.39■□□□□ 0.21
ZNF3-204ENST00000412947 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
ZNF3-204ENST00000412947 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
ZNF3-204ENST00000412947 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
ZNF3-204ENST00000412947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
ZNF3-204ENST00000412947 MSH5O43196 834 aa16.38■□□□□ 0.21
ZNF3-204ENST00000412947 A1BGP04217 495 aa16.38■□□□□ 0.21
ZNF3-204ENST00000412947 EIF2S2P20042 333 aaKnown RBP16.38■□□□□ 0.21
ZNF3-204ENST00000412947 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
ZNF3-204ENST00000412947 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-204ENST00000412947 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
ZNF3-204ENST00000412947 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
ZNF3-204ENST00000412947 ADRA2BP18089 450 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 TRAPPC3LQ5T215 181 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
ZNF3-204ENST00000412947 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
ZNF3-204ENST00000412947 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
ZNF3-204ENST00000412947 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
ZNF3-204ENST00000412947 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
ZNF3-204ENST00000412947 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
ZNF3-204ENST00000412947 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 RFC4P35249 363 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
ZNF3-204ENST00000412947 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
ZNF3-204ENST00000412947 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
ZNF3-204ENST00000412947 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
ZNF3-204ENST00000412947 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
ZNF3-204ENST00000412947 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
ZNF3-204ENST00000412947 A0A087WZG4 1122 aa16.34■□□□□ 0.21
ZNF3-204ENST00000412947 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
ZNF3-204ENST00000412947 TSPYL6Q8N831 410 aa16.34■□□□□ 0.21
ZNF3-204ENST00000412947 COL15A1P39059 1388 aa16.34■□□□□ 0.21
ZNF3-204ENST00000412947 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
ZNF3-204ENST00000412947 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
ZNF3-204ENST00000412947 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
ZNF3-204ENST00000412947 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
ZNF3-204ENST00000412947 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
ZNF3-204ENST00000412947 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
ZNF3-204ENST00000412947 MYL6BP14649 208 aa16.32■□□□□ 0.2
ZNF3-204ENST00000412947 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
ZNF3-204ENST00000412947 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
ZNF3-204ENST00000412947 ARXQ96QS3 562 aa16.32■□□□□ 0.2
ZNF3-204ENST00000412947 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
ZNF3-204ENST00000412947 ZPR1O75312 459 aa16.31■□□□□ 0.2
ZNF3-204ENST00000412947 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
ZNF3-204ENST00000412947 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
ZNF3-204ENST00000412947 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
ZNF3-204ENST00000412947 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
ZNF3-204ENST00000412947 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
ZNF3-204ENST00000412947 VAMP4O75379 141 aa16.3■□□□□ 0.2
ZNF3-204ENST00000412947 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
ZNF3-204ENST00000412947 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
ZNF3-204ENST00000412947 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
ZNF3-204ENST00000412947 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
ZNF3-204ENST00000412947 ANXA1P04083 346 aa16.29■□□□□ 0.2
ZNF3-204ENST00000412947 PDIA6Q15084 440 aa16.29■□□□□ 0.2
ZNF3-204ENST00000412947 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
ZNF3-204ENST00000412947 DZIP3Q86Y13 1208 aaKnown RBP16.29■□□□□ 0.2
ZNF3-204ENST00000412947 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
ZNF3-204ENST00000412947 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
ZNF3-204ENST00000412947 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
ZNF3-204ENST00000412947 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
ZNF3-204ENST00000412947 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
ZNF3-204ENST00000412947 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
ZNF3-204ENST00000412947 USPL1Q5W0Q7 1092 aa16.27■□□□□ 0.2
ZNF3-204ENST00000412947 MSL1Q68DK7 614 aa16.27■□□□□ 0.2
ZNF3-204ENST00000412947 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
ZNF3-204ENST00000412947 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
ZNF3-204ENST00000412947 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
ZNF3-204ENST00000412947 GYS1P13807 737 aa16.26■□□□□ 0.19
ZNF3-204ENST00000412947 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
ZNF3-204ENST00000412947 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
ZNF3-204ENST00000412947 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
ZNF3-204ENST00000412947 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
ZNF3-204ENST00000412947 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
ZNF3-204ENST00000412947 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
ZNF3-204ENST00000412947 POLD1P28340 1107 aa16.25■□□□□ 0.19
ZNF3-204ENST00000412947 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
ZNF3-204ENST00000412947 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
ZNF3-204ENST00000412947 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
ZNF3-204ENST00000412947 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms