RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
BRCC3-207ENST00000411985 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
BRCC3-207ENST00000411985 NEFMP07197 916 aa12.22□□□□□ -0.45
BRCC3-207ENST00000411985 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
BRCC3-207ENST00000411985 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
BRCC3-207ENST00000411985 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
BRCC3-207ENST00000411985 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
BRCC3-207ENST00000411985 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
BRCC3-207ENST00000411985 RFC4P35249 363 aa12.21□□□□□ -0.45
BRCC3-207ENST00000411985 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
BRCC3-207ENST00000411985 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
BRCC3-207ENST00000411985 NUP98P52948 1817 aa12.21□□□□□ -0.46
BRCC3-207ENST00000411985 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
BRCC3-207ENST00000411985 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
BRCC3-207ENST00000411985 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
BRCC3-207ENST00000411985 MCM10Q7L590 875 aa12.2□□□□□ -0.46
BRCC3-207ENST00000411985 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
BRCC3-207ENST00000411985 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
BRCC3-207ENST00000411985 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
BRCC3-207ENST00000411985 COL15A1P39059 1388 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 MAPK8IP3Q9UPT6 1336 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 GYS1P13807 737 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
BRCC3-207ENST00000411985 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-207ENST00000411985 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
BRCC3-207ENST00000411985 ZBTB22O15209 634 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 MMP10P09238 476 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 DCTN1Q14203 1278 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-207ENST00000411985 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
BRCC3-207ENST00000411985 YY1P25490 414 aa12.17□□□□□ -0.46
BRCC3-207ENST00000411985 GPR162Q16538 588 aa12.17□□□□□ -0.46
BRCC3-207ENST00000411985 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
BRCC3-207ENST00000411985 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
BRCC3-207ENST00000411985 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 ARFGEF2Q9Y6D5 1785 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 STARD3NLO95772 234 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 DSG3P32926 999 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 NFE2L2Q16236 605 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
BRCC3-207ENST00000411985 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
BRCC3-207ENST00000411985 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
BRCC3-207ENST00000411985 SBF1O95248 1867 aa12.16□□□□□ -0.46
BRCC3-207ENST00000411985 KCNQ3O43525 872 aa12.15□□□□□ -0.46
BRCC3-207ENST00000411985 ZPR1O75312 459 aa12.15□□□□□ -0.46
BRCC3-207ENST00000411985 CANXP27824 592 aaKnown RBP12.15□□□□□ -0.46
BRCC3-207ENST00000411985 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
BRCC3-207ENST00000411985 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
BRCC3-207ENST00000411985 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-207ENST00000411985 FKBP8Q14318 412 aa12.14□□□□□ -0.47
BRCC3-207ENST00000411985 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-207ENST00000411985 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
BRCC3-207ENST00000411985 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
BRCC3-207ENST00000411985 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
BRCC3-207ENST00000411985 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
BRCC3-207ENST00000411985 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
BRCC3-207ENST00000411985 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-207ENST00000411985 A0A087WZG4 1122 aa12.12□□□□□ -0.47
BRCC3-207ENST00000411985 SNRPA1P09661 255 aaKnown RBP12.12□□□□□ -0.47
BRCC3-207ENST00000411985 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
BRCC3-207ENST00000411985 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
BRCC3-207ENST00000411985 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-207ENST00000411985 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 TM4SF1P30408 202 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 RIPK4P57078 832 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 TGFB2P61812 414 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 DDR1Q08345 913 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
BRCC3-207ENST00000411985 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-207ENST00000411985 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
BRCC3-207ENST00000411985 DICER1Q9UPY3 1922 aaKnown RBP12.1□□□□□ -0.47
BRCC3-207ENST00000411985 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
BRCC3-207ENST00000411985 A1BGP04217 495 aa12.1□□□□□ -0.47
BRCC3-207ENST00000411985 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
BRCC3-207ENST00000411985 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
BRCC3-207ENST00000411985 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
BRCC3-207ENST00000411985 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
BRCC3-207ENST00000411985 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
BRCC3-207ENST00000411985 NFIXQ14938 502 aa12.09□□□□□ -0.47
BRCC3-207ENST00000411985 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
BRCC3-207ENST00000411985 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
BRCC3-207ENST00000411985 FER1L6Q2WGJ9 1857 aa12.08□□□□□ -0.48
BRCC3-207ENST00000411985 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
BRCC3-207ENST00000411985 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
BRCC3-207ENST00000411985 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
BRCC3-207ENST00000411985 LAMB2P55268 1798 aa12.07□□□□□ -0.48
BRCC3-207ENST00000411985 A0A0G2JLW4 131 aa12.07□□□□□ -0.48
BRCC3-207ENST00000411985 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-207ENST00000411985 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
BRCC3-207ENST00000411985 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
BRCC3-207ENST00000411985 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
BRCC3-207ENST00000411985 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
BRCC3-207ENST00000411985 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms