RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 RC3H1Q5TC82 1133 aaKnown RBP23.89■■□□□ 1.41
CDC42-204ENST00000411827 DNAJC10Q8IXB1 793 aa23.89■■□□□ 1.41
CDC42-204ENST00000411827 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.89■■□□□ 1.41
CDC42-204ENST00000411827 SLC4A9Q96Q91 983 aa23.89■■□□□ 1.41
CDC42-204ENST00000411827 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
CDC42-204ENST00000411827 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
CDC42-204ENST00000411827 LY75O60449 1722 aa23.89■■□□□ 1.41
CDC42-204ENST00000411827 IPO8O15397 1037 aaKnown RBP23.88■■□□□ 1.41
CDC42-204ENST00000411827 SSH1Q8WYL5 1049 aa23.88■■□□□ 1.41
CDC42-204ENST00000411827 LAMB4A4D0S4 1761 aa23.88■■□□□ 1.41
CDC42-204ENST00000411827 TXNRD1Q16881 649 aa23.87■■□□□ 1.41
CDC42-204ENST00000411827 TNS1Q9HBL0 1735 aaKnown RBP23.87■■□□□ 1.41
CDC42-204ENST00000411827 CNTNAP4Q9C0A0 1308 aa23.86■■□□□ 1.41
CDC42-204ENST00000411827 CACNA1FO60840 1977 aa23.86■■□□□ 1.41
CDC42-204ENST00000411827 SLC4A2P04920 1241 aa23.85■■□□□ 1.41
CDC42-204ENST00000411827 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
CDC42-204ENST00000411827 ARHGAP45Q92619 1136 aa23.85■■□□□ 1.41
CDC42-204ENST00000411827 CCDC87Q9NVE4 849 aa23.85■■□□□ 1.41
CDC42-204ENST00000411827 PRAMEF22A3QJZ6 481 aa23.84■■□□□ 1.41
CDC42-204ENST00000411827 MS4A1P11836 297 aa23.84■■□□□ 1.41
CDC42-204ENST00000411827 ITPK1Q13572 414 aa23.84■■□□□ 1.41
CDC42-204ENST00000411827 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
CDC42-204ENST00000411827 PTPRCP08575 1304 aa23.84■■□□□ 1.41
CDC42-204ENST00000411827 C5P01031 1676 aa23.83■■□□□ 1.41
CDC42-204ENST00000411827 IL6STP40189 918 aaPredicted RBP23.83■■□□□ 1.41
CDC42-204ENST00000411827 CHPF2Q9P2E5 772 aa23.83■■□□□ 1.41
CDC42-204ENST00000411827 TJP1Q07157 1748 aa23.82■■□□□ 1.4
CDC42-204ENST00000411827 CRKLP46109 303 aaKnown RBP23.82■■□□□ 1.4
CDC42-204ENST00000411827 CAMKK2Q96RR4 588 aa23.82■■□□□ 1.4
CDC42-204ENST00000411827 DDX58O95786 925 aaKnown RBP23.81■■□□□ 1.4
CDC42-204ENST00000411827 PDIA6Q15084 440 aa23.81■■□□□ 1.4
CDC42-204ENST00000411827 A1BGP04217 495 aa23.8■■□□□ 1.4
CDC42-204ENST00000411827 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
CDC42-204ENST00000411827 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
CDC42-204ENST00000411827 A0A087WZG4 1122 aa23.79■■□□□ 1.4
CDC42-204ENST00000411827 INTS5Q6P9B9 1019 aaKnown RBP23.79■■□□□ 1.4
CDC42-204ENST00000411827 PROM2Q8N271 834 aa23.79■■□□□ 1.4
CDC42-204ENST00000411827 API5Q9BZZ5 524 aaKnown RBP23.79■■□□□ 1.4
CDC42-204ENST00000411827 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
CDC42-204ENST00000411827 COL5A3P25940 1745 aaPredicted RBP23.79■■□□□ 1.4
CDC42-204ENST00000411827 RGL2O15211 777 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 RPS6KA4O75676 772 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 BCAR3O75815 825 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 ADRA2BP18089 450 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 ZKSCAN2Q63HK3 967 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 RNF123Q5XPI4 1314 aa23.78■■□□□ 1.4
CDC42-204ENST00000411827 NBPF26B4DH59 902 aa23.77■■□□□ 1.4
CDC42-204ENST00000411827 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
CDC42-204ENST00000411827 FLIIQ13045 1269 aa23.77■■□□□ 1.4
CDC42-204ENST00000411827 NBPF14Q5TI25 921 aa23.77■■□□□ 1.4
CDC42-204ENST00000411827 NBPF10Q6P3W6 841 aaKnown RBP23.77■■□□□ 1.4
CDC42-204ENST00000411827 NBPF15Q8N660 670 aa23.77■■□□□ 1.4
CDC42-204ENST00000411827 AK7Q96M32 723 aa23.77■■□□□ 1.4
CDC42-204ENST00000411827 RREB1Q92766 1687 aa23.76■■□□□ 1.39
CDC42-204ENST00000411827 EIF5P55010 431 aaKnown RBP23.76■■□□□ 1.39
CDC42-204ENST00000411827 EN1Q05925 392 aaPredicted RBP23.76■■□□□ 1.39
CDC42-204ENST00000411827 BCL2L13Q9BXK5 485 aa23.76■■□□□ 1.39
CDC42-204ENST00000411827 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
CDC42-204ENST00000411827 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
CDC42-204ENST00000411827 MYL6BP14649 208 aa23.75■■□□□ 1.39
CDC42-204ENST00000411827 LRP10Q7Z4F1 713 aa23.75■■□□□ 1.39
CDC42-204ENST00000411827 FLAD1Q8NFF5 587 aa23.75■■□□□ 1.39
CDC42-204ENST00000411827 NOB1Q9ULX3 412 aaKnown RBP23.75■■□□□ 1.39
CDC42-204ENST00000411827 TCERG1O14776 1098 aaKnown RBP23.74■■□□□ 1.39
CDC42-204ENST00000411827 PDE3AQ14432 1141 aa23.74■■□□□ 1.39
CDC42-204ENST00000411827 ATF7IPQ6VMQ6 1270 aa23.74■■□□□ 1.39
CDC42-204ENST00000411827 TAF1LQ8IZX4 1826 aa23.74■■□□□ 1.39
CDC42-204ENST00000411827 RRP1P56182 461 aaKnown RBP23.73■■□□□ 1.39
CDC42-204ENST00000411827 FKBP5Q13451 457 aaPredicted RBP23.73■■□□□ 1.39
CDC42-204ENST00000411827 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
CDC42-204ENST00000411827 PROSER3Q2NL68 480 aa23.73■■□□□ 1.39
CDC42-204ENST00000411827 KIF6Q6ZMV9 814 aa23.73■■□□□ 1.39
CDC42-204ENST00000411827 DEFB132Q7Z7B7 95 aa23.73■■□□□ 1.39
CDC42-204ENST00000411827 FRAT1Q92837 279 aaPredicted RBP23.73■■□□□ 1.39
CDC42-204ENST00000411827 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
CDC42-204ENST00000411827 GNPATO15228 680 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 SSFA2P28290 1259 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 KSR2Q6VAB6 950 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 ANKRD13DQ6ZTN6 518 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 COPS6Q7L5N1 327 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 XAGE3Q8WTP9 111 aa23.72■■□□□ 1.39
CDC42-204ENST00000411827 SUPT16HQ9Y5B9 1047 aaKnown RBP23.72■■□□□ 1.39
CDC42-204ENST00000411827 ERVV-1B6SEH8 477 aa23.71■■□□□ 1.39
CDC42-204ENST00000411827 KCNQ4P56696 695 aa23.71■■□□□ 1.39
CDC42-204ENST00000411827 PLBD2Q8NHP8 589 aa23.71■■□□□ 1.39
CDC42-204ENST00000411827 PHAXQ9H814 394 aaKnown RBP23.71■■□□□ 1.39
CDC42-204ENST00000411827 ANXA1P04083 346 aa23.69■■□□□ 1.38
CDC42-204ENST00000411827 TRAPPC3LQ5T215 181 aa23.69■■□□□ 1.38
CDC42-204ENST00000411827 G2E3Q7L622 706 aa23.69■■□□□ 1.38
CDC42-204ENST00000411827 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
CDC42-204ENST00000411827 AKT1S1Q96B36 256 aa23.69■■□□□ 1.38
CDC42-204ENST00000411827 STK32BQ9NY57 414 aa23.69■■□□□ 1.38
CDC42-204ENST00000411827 COL15A1P39059 1388 aa23.68■■□□□ 1.38
CDC42-204ENST00000411827 TRIM27P14373 513 aa23.68■■□□□ 1.38
CDC42-204ENST00000411827 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
CDC42-204ENST00000411827 ZNF652Q9Y2D9 606 aa23.68■■□□□ 1.38
CDC42-204ENST00000411827 MAP3K15Q6ZN16 1313 aa23.67■■□□□ 1.38
CDC42-204ENST00000411827 AIMP1Q12904 312 aaKnown RBP23.67■■□□□ 1.38
CDC42-204ENST00000411827 HSP90AB3PQ58FF7 597 aa23.67■■□□□ 1.38
CDC42-204ENST00000411827 DZIP3Q86Y13 1208 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms