RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 C5P01031 1676 aa12.1□□□□□ -0.47
ERGIC3-204ENST00000411577 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
ERGIC3-204ENST00000411577 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
ERGIC3-204ENST00000411577 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
ERGIC3-204ENST00000411577 APAF1O14727 1248 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 SMIM5Q71RC9 77 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 NLGN1Q8N2Q7 840 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
ERGIC3-204ENST00000411577 A0A087WZG4 1122 aa12.07□□□□□ -0.48
ERGIC3-204ENST00000411577 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-204ENST00000411577 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
ERGIC3-204ENST00000411577 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
ERGIC3-204ENST00000411577 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 FHDC1Q9C0D6 1143 aaPredicted RBP12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 ZBTB1Q9Y2K1 713 aa12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
ERGIC3-204ENST00000411577 CHL1O00533 1208 aa12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 ZPR1O75312 459 aa12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 CAPN15O75808 1086 aa12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
ERGIC3-204ENST00000411577 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-204ENST00000411577 A1BGP04217 495 aa12.04□□□□□ -0.48
ERGIC3-204ENST00000411577 GYS1P13807 737 aa12.04□□□□□ -0.48
ERGIC3-204ENST00000411577 GPR162Q16538 588 aa12.04□□□□□ -0.48
ERGIC3-204ENST00000411577 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
ERGIC3-204ENST00000411577 SIPA1L3O60292 1781 aaPredicted RBP12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 CFAP44Q96MT7 982 aa12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 COL15A1P39059 1388 aa12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 TJP1Q07157 1748 aa12.03□□□□□ -0.48
ERGIC3-204ENST00000411577 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.48
ERGIC3-204ENST00000411577 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.48
ERGIC3-204ENST00000411577 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 MMP10P09238 476 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 GNAI1P63096 354 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 TUBGCP6Q96RT7 1819 aa12.02□□□□□ -0.49
ERGIC3-204ENST00000411577 CHD4Q14839 1912 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 HSPA6P17066 643 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 IFT57Q9NWB7 429 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
ERGIC3-204ENST00000411577 DLG5Q8TDM6 1919 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 MYH14Q7Z406 1995 aaKnown RBP12□□□□□ -0.49
ERGIC3-204ENST00000411577 ZNF853P0CG23 659 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 TM4SF1P30408 202 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 FKBP8Q14318 412 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 ERBB4Q15303 1308 aa12□□□□□ -0.49
ERGIC3-204ENST00000411577 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 RGL2O15211 777 aa11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 HOXB7P09629 217 aa11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
ERGIC3-204ENST00000411577 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 CLEC4GQ6UXB4 293 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
ERGIC3-204ENST00000411577 IL16Q14005 1332 aa11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 NFIXQ14938 502 aa11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 WDR63Q8IWG1 891 aa11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
ERGIC3-204ENST00000411577 POLRMTO00411 1230 aaKnown RBP11.96□□□□□ -0.49
ERGIC3-204ENST00000411577 TGFB2P61812 414 aa11.96□□□□□ -0.49
ERGIC3-204ENST00000411577 DUSP27Q5VZP5 1158 aa11.96□□□□□ -0.49
ERGIC3-204ENST00000411577 KDM3BQ7LBC6 1761 aa11.95□□□□□ -0.5
ERGIC3-204ENST00000411577 ERVV-1B6SEH8 477 aa11.95□□□□□ -0.5
ERGIC3-204ENST00000411577 SERPINB2P05120 415 aa11.95□□□□□ -0.5
ERGIC3-204ENST00000411577 MYL6BP14649 208 aa11.95□□□□□ -0.5
ERGIC3-204ENST00000411577 DDR1Q08345 913 aa11.95□□□□□ -0.5
ERGIC3-204ENST00000411577 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms