RNA–Protein interactions for RNA: ENST00000409633.5

UBE2F-203, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-203ENST00000409633 GYS1P13807 737 aa26■■□□□ 1.75
UBE2F-203ENST00000409633 ADRA2BP18089 450 aa26■■□□□ 1.75
UBE2F-203ENST00000409633 MMP10P09238 476 aa25.99■■□□□ 1.75
UBE2F-203ENST00000409633 RIPK4P57078 832 aa25.99■■□□□ 1.75
UBE2F-203ENST00000409633 NEUROD2Q15784 382 aa25.99■■□□□ 1.75
UBE2F-203ENST00000409633 C4AP0C0L4 1744 aa25.98■■□□□ 1.75
UBE2F-203ENST00000409633 PIP4K2AP48426 406 aaPredicted RBP25.98■■□□□ 1.75
UBE2F-203ENST00000409633 TAF7Q15545 349 aaPredicted RBP25.98■■□□□ 1.75
UBE2F-203ENST00000409633 TMPOP42166 694 aaKnown RBP25.97■■□□□ 1.75
UBE2F-203ENST00000409633 A1BGP04217 495 aa25.96■■□□□ 1.75
UBE2F-203ENST00000409633 FKBP8Q14318 412 aa25.96■■□□□ 1.75
UBE2F-203ENST00000409633 PELP1Q8IZL8 1130 aaKnown RBP25.96■■□□□ 1.75
UBE2F-203ENST00000409633 ZNF330Q9Y3S2 320 aaPredicted RBP25.96■■□□□ 1.75
UBE2F-203ENST00000409633 USP16Q9Y5T5 823 aa25.96■■□□□ 1.75
UBE2F-203ENST00000409633 USP42Q9H9J4 1324 aaKnown RBP25.95■■□□□ 1.75
UBE2F-203ENST00000409633 STARD3NLO95772 234 aa25.95■■□□□ 1.74
UBE2F-203ENST00000409633 USPL1Q5W0Q7 1092 aa25.95■■□□□ 1.74
UBE2F-203ENST00000409633 WWC3Q9ULE0 1092 aa25.95■■□□□ 1.74
UBE2F-203ENST00000409633 COL15A1P39059 1388 aa25.95■■□□□ 1.74
UBE2F-203ENST00000409633 SENP3-EIF4A1A0A087X0R7 540 aa25.93■■□□□ 1.74
UBE2F-203ENST00000409633 NLGN1Q8N2Q7 840 aa25.93■■□□□ 1.74
UBE2F-203ENST00000409633 RUNDC1Q96C34 613 aa25.93■■□□□ 1.74
UBE2F-203ENST00000409633 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
UBE2F-203ENST00000409633 TEX13AQ9BXU3 409 aaPredicted RBP25.91■■□□□ 1.74
UBE2F-203ENST00000409633 ZPR1O75312 459 aa25.9■■□□□ 1.74
UBE2F-203ENST00000409633 EIF5P55010 431 aaKnown RBP25.9■■□□□ 1.74
UBE2F-203ENST00000409633 ANP32CO43423 234 aa25.89■■□□□ 1.74
UBE2F-203ENST00000409633 SNRPA1P09661 255 aaKnown RBP25.89■■□□□ 1.74
UBE2F-203ENST00000409633 DDR1Q08345 913 aa25.89■■□□□ 1.74
UBE2F-203ENST00000409633 GPR162Q16538 588 aa25.89■■□□□ 1.74
UBE2F-203ENST00000409633 BCL2L12Q9HB09 334 aa25.89■■□□□ 1.74
UBE2F-203ENST00000409633 CD2APQ9Y5K6 639 aa25.89■■□□□ 1.74
UBE2F-203ENST00000409633 NARFQ9UHQ1 456 aa25.88■■□□□ 1.73
UBE2F-203ENST00000409633 TRIM35Q9UPQ4 493 aa25.88■■□□□ 1.73
UBE2F-203ENST00000409633 TBC1D2BQ9UPU7 963 aa25.88■■□□□ 1.73
UBE2F-203ENST00000409633 PARP3Q9Y6F1 533 aa25.87■■□□□ 1.73
UBE2F-203ENST00000409633 YBX3P16989 372 aaKnown RBP eCLIP25.86■■□□□ 1.731e-6■■□□□ 11.6
UBE2F-203ENST00000409633 EIF4A1P60842 406 aaKnown RBP25.86■■□□□ 1.73
UBE2F-203ENST00000409633 PNISRQ8TF01 805 aaKnown RBP25.85■■□□□ 1.73
UBE2F-203ENST00000409633 TSPYL4Q9UJ04 414 aa25.85■■□□□ 1.73
UBE2F-203ENST00000409633 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
UBE2F-203ENST00000409633 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
UBE2F-203ENST00000409633 APAF1O14727 1248 aa25.84■■□□□ 1.73
UBE2F-203ENST00000409633 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
UBE2F-203ENST00000409633 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
UBE2F-203ENST00000409633 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
UBE2F-203ENST00000409633 LAS1LQ9Y4W2 734 aaKnown RBP25.84■■□□□ 1.73
UBE2F-203ENST00000409633 TM4SF1P30408 202 aa25.83■■□□□ 1.73
UBE2F-203ENST00000409633 IL6STP40189 918 aaPredicted RBP25.83■■□□□ 1.73
UBE2F-203ENST00000409633 LMOD3Q0VAK6 560 aa25.83■■□□□ 1.73
UBE2F-203ENST00000409633 NFIXQ14938 502 aa25.83■■□□□ 1.73
UBE2F-203ENST00000409633 POLRMTO00411 1230 aaKnown RBP25.82■■□□□ 1.72
UBE2F-203ENST00000409633 GIGYF1O75420 1035 aaPredicted RBP25.82■■□□□ 1.72
UBE2F-203ENST00000409633 MRS2Q9HD23 443 aa25.82■■□□□ 1.72
UBE2F-203ENST00000409633 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
UBE2F-203ENST00000409633 A0A087WZG4 1122 aa25.8■■□□□ 1.72
UBE2F-203ENST00000409633 A0A0G2JLW4 131 aa25.79■■□□□ 1.72
UBE2F-203ENST00000409633 KRT24Q2M2I5 525 aa25.79■■□□□ 1.72
UBE2F-203ENST00000409633 TBC1D9BQ66K14 1250 aa25.79■■□□□ 1.72
UBE2F-203ENST00000409633 NGEFQ8N5V2 710 aa25.79■■□□□ 1.72
UBE2F-203ENST00000409633 CAMTA2O94983 1202 aa25.78■■□□□ 1.72
UBE2F-203ENST00000409633 YY1P25490 414 aa25.78■■□□□ 1.72
UBE2F-203ENST00000409633 DZIP3Q86Y13 1208 aaKnown RBP25.78■■□□□ 1.72
UBE2F-203ENST00000409633 PXDNLA1KZ92 1463 aa25.78■■□□□ 1.72
UBE2F-203ENST00000409633 NPM2Q86SE8 214 aaKnown RBP25.77■■□□□ 1.72
UBE2F-203ENST00000409633 DPEP1P16444 411 aa25.76■■□□□ 1.71
UBE2F-203ENST00000409633 SERPINB2P05120 415 aa25.75■■□□□ 1.71
UBE2F-203ENST00000409633 CCDC24Q8N4L8 307 aa25.75■■□□□ 1.71
UBE2F-203ENST00000409633 NECTIN2Q92692 538 aa25.75■■□□□ 1.71
UBE2F-203ENST00000409633 MYL6BP14649 208 aa25.74■■□□□ 1.71
UBE2F-203ENST00000409633 EIF2S2P20042 333 aaKnown RBP25.74■■□□□ 1.71
UBE2F-203ENST00000409633 CHL1O00533 1208 aa25.73■■□□□ 1.71
UBE2F-203ENST00000409633 N4BP2Q86UW6 1770 aaPredicted RBP25.73■■□□□ 1.71
UBE2F-203ENST00000409633 KIAA1551Q9HCM1 1747 aa25.73■■□□□ 1.71
UBE2F-203ENST00000409633 SCN7AQ01118 1682 aa25.73■■□□□ 1.71
UBE2F-203ENST00000409633 LAMB4A4D0S4 1761 aa25.72■■□□□ 1.71
UBE2F-203ENST00000409633 ANXA1P04083 346 aa25.72■■□□□ 1.71
UBE2F-203ENST00000409633 CHRNA5P30532 468 aa25.72■■□□□ 1.71
UBE2F-203ENST00000409633 CARMIL3Q8ND23 1372 aa25.71■■□□□ 1.71
UBE2F-203ENST00000409633 TGFB2P61812 414 aa25.71■■□□□ 1.71
UBE2F-203ENST00000409633 KIF13BQ9NQT8 1826 aa25.71■■□□□ 1.71
UBE2F-203ENST00000409633 TTLL7Q6ZT98 887 aa25.7■■□□□ 1.7
UBE2F-203ENST00000409633 KCNA3P22001 575 aa25.69■■□□□ 1.7
UBE2F-203ENST00000409633 HLFQ16534 295 aa25.69■■□□□ 1.7
UBE2F-203ENST00000409633 PROSER3Q2NL68 480 aa25.69■■□□□ 1.7
UBE2F-203ENST00000409633 BABAM1Q9NWV8 329 aa25.69■■□□□ 1.7
UBE2F-203ENST00000409633 BCS1LQ9Y276 419 aa25.69■■□□□ 1.7
UBE2F-203ENST00000409633 AFDNP55196 1824 aaKnown RBP25.68■■□□□ 1.7
UBE2F-203ENST00000409633 MBIPQ9NS73 344 aa25.68■■□□□ 1.7
UBE2F-203ENST00000409633 BCORQ6W2J9 1755 aa25.67■■□□□ 1.7
UBE2F-203ENST00000409633 GRIN3BO60391 1043 aa25.66■■□□□ 1.7
UBE2F-203ENST00000409633 PDIA6Q15084 440 aa25.66■■□□□ 1.7
UBE2F-203ENST00000409633 FAM9BQ8IZU0 186 aa25.66■■□□□ 1.7
UBE2F-203ENST00000409633 CFAP44Q96MT7 982 aa25.66■■□□□ 1.7
UBE2F-203ENST00000409633 SETDB2Q96T68 719 aa25.66■■□□□ 1.7
UBE2F-203ENST00000409633 SALL2Q9Y467 1007 aaPredicted RBP25.66■■□□□ 1.7
UBE2F-203ENST00000409633 FAM177BA6PVY3 158 aa25.65■■□□□ 1.7
UBE2F-203ENST00000409633 NRXN2Q9P2S2 1712 aa25.64■■□□□ 1.7
UBE2F-203ENST00000409633 ZNF853P0CG23 659 aa25.64■■□□□ 1.7
UBE2F-203ENST00000409633 PRR5LQ6MZQ0 368 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms