RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 M0R2N6 131 aa8.26□□□□□ -1.09
PMS1-203ENST00000409593 VSIG8P0DPA2 414 aa8.26□□□□□ -1.09
PMS1-203ENST00000409593 GMPRP36959 345 aa8.26□□□□□ -1.09
PMS1-203ENST00000409593 INSM1Q01101 510 aaPredicted RBP8.26□□□□□ -1.09
PMS1-203ENST00000409593 NBPF1Q3BBV0 1214 aa8.26□□□□□ -1.09
PMS1-203ENST00000409593 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
PMS1-203ENST00000409593 WIPF1O43516 503 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 MSX1P28360 303 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 FOXK2Q01167 660 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 PBXIP1Q96AQ6 731 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
PMS1-203ENST00000409593 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
PMS1-203ENST00000409593 H7C1W4 665 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 CSB-PGBD3P0DP91 1061 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 PGBD3Q8N328 593 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
PMS1-203ENST00000409593 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 DBN1Q16643 649 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 ARXQ96QS3 562 aa8.24□□□□□ -1.09
PMS1-203ENST00000409593 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
PMS1-203ENST00000409593 TATP17735 454 aaPredicted RBP8.23□□□□□ -1.09
PMS1-203ENST00000409593 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
PMS1-203ENST00000409593 GPR161Q8N6U8 529 aaKnown RBP8.23□□□□□ -1.09
PMS1-203ENST00000409593 ZDHHC1Q8WTX9 485 aa8.23□□□□□ -1.09
PMS1-203ENST00000409593 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
PMS1-203ENST00000409593 L3MBTL2Q969R5 705 aa8.23□□□□□ -1.09
PMS1-203ENST00000409593 ARID3AQ99856 593 aa8.23□□□□□ -1.09
PMS1-203ENST00000409593 SERTM1A2A2V5 107 aa8.22□□□□□ -1.09
PMS1-203ENST00000409593 GPR25O00155 361 aa8.22□□□□□ -1.09
PMS1-203ENST00000409593 PPP1R12BO60237 982 aaPredicted RBP8.22□□□□□ -1.09
PMS1-203ENST00000409593 NOS2P35228 1153 aa8.22□□□□□ -1.09
PMS1-203ENST00000409593 SH3PXD2AQ5TCZ1 1133 aa8.22□□□□□ -1.09
PMS1-203ENST00000409593 SCG3Q8WXD2 468 aaKnown RBP8.22□□□□□ -1.09
PMS1-203ENST00000409593 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
PMS1-203ENST00000409593 ATP4AP20648 1035 aa8.21□□□□□ -1.09
PMS1-203ENST00000409593 TEAD4Q15561 434 aa8.21□□□□□ -1.09
PMS1-203ENST00000409593 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.09
PMS1-203ENST00000409593 GMCL1Q96IK5 515 aa8.21□□□□□ -1.09
PMS1-203ENST00000409593 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.09
PMS1-203ENST00000409593 TXLNAP40222 546 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
PMS1-203ENST00000409593 EFHC2Q5JST6 749 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 BICDL1Q6ZP65 573 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
PMS1-203ENST00000409593 ZDHHC3Q9NYG2 299 aa8.21□□□□□ -1.1
PMS1-203ENST00000409593 ATAD2Q6PL18 1390 aa8.2□□□□□ -1.1
PMS1-203ENST00000409593 ATG7O95352 703 aa8.2□□□□□ -1.1
PMS1-203ENST00000409593 GAS2L2Q8NHY3 880 aa8.2□□□□□ -1.1
PMS1-203ENST00000409593 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
PMS1-203ENST00000409593 EML1O00423 815 aa8.19□□□□□ -1.1
PMS1-203ENST00000409593 C21orf2O43822 256 aa8.19□□□□□ -1.1
PMS1-203ENST00000409593 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
PMS1-203ENST00000409593 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
PMS1-203ENST00000409593 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
PMS1-203ENST00000409593 ELOAQ14241 798 aaKnown RBP8.18□□□□□ -1.1
PMS1-203ENST00000409593 CRISPLD1Q9H336 500 aa8.18□□□□□ -1.1
PMS1-203ENST00000409593 HCN4Q9Y3Q4 1203 aa8.18□□□□□ -1.1
PMS1-203ENST00000409593 GJA3Q9Y6H8 435 aa8.18□□□□□ -1.1
PMS1-203ENST00000409593 THBS1P07996 1170 aa8.18□□□□□ -1.1
PMS1-203ENST00000409593 LBRQ14739 615 aaKnown RBP8.18□□□□□ -1.1
PMS1-203ENST00000409593 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
PMS1-203ENST00000409593 A0A1W2PNR3 127 aa8.17□□□□□ -1.1
PMS1-203ENST00000409593 KRT76Q01546 638 aa8.17□□□□□ -1.1
PMS1-203ENST00000409593 TMEM164Q5U3C3 297 aa8.17□□□□□ -1.1
PMS1-203ENST00000409593 RHPN1Q8TCX5 695 aa8.17□□□□□ -1.1
PMS1-203ENST00000409593 NGLY1Q96IV0 654 aa8.17□□□□□ -1.1
PMS1-203ENST00000409593 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
PMS1-203ENST00000409593 IGFBP4P22692 258 aa8.16□□□□□ -1.1
PMS1-203ENST00000409593 PHACTR1Q9C0D0 580 aa8.16□□□□□ -1.1
PMS1-203ENST00000409593 PRMT3O60678 531 aa8.15□□□□□ -1.1
PMS1-203ENST00000409593 GAS6Q14393 721 aa8.15□□□□□ -1.1
PMS1-203ENST00000409593 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
PMS1-203ENST00000409593 ZIC5Q96T25 663 aa8.15□□□□□ -1.1
PMS1-203ENST00000409593 C2orf49Q9BVC5 232 aaPredicted RBP8.15□□□□□ -1.1
PMS1-203ENST00000409593 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
PMS1-203ENST00000409593 FIGNL1Q6PIW4 674 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 PRIMPOLQ96LW4 560 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 NEUROD4Q9HD90 331 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
PMS1-203ENST00000409593 WEE1P30291 646 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 SUZ12Q15022 739 aaKnown RBP8.14□□□□□ -1.11
PMS1-203ENST00000409593 NLRP8Q86W28 1048 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 ALDH16A1Q8IZ83 802 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 ZCCHC2Q9C0B9 1178 aaKnown RBP8.14□□□□□ -1.11
PMS1-203ENST00000409593 PHF24Q9UPV7 400 aa8.14□□□□□ -1.11
PMS1-203ENST00000409593 DCDC2BA2VCK2 349 aa8.13□□□□□ -1.11
PMS1-203ENST00000409593 UBAP2LQ14157 1087 aaKnown RBP8.13□□□□□ -1.11
PMS1-203ENST00000409593 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
PMS1-203ENST00000409593 LRRC69Q6ZNQ3 347 aa8.13□□□□□ -1.11
PMS1-203ENST00000409593 STAG2Q8N3U4 1231 aa8.13□□□□□ -1.11
PMS1-203ENST00000409593 ATXN7O15265 892 aaPredicted RBP8.12□□□□□ -1.11
PMS1-203ENST00000409593 FOXO3O43524 673 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms