RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 RC3H1Q5TC82 1133 aaKnown RBP25.04■■□□□ 1.6
PPM1B-207ENST00000409486 INTS5Q6P9B9 1019 aaKnown RBP25.04■■□□□ 1.6
PPM1B-207ENST00000409486 ZBTB1Q9Y2K1 713 aa25.04■■□□□ 1.6
PPM1B-207ENST00000409486 KDM3BQ7LBC6 1761 aa25.04■■□□□ 1.6
PPM1B-207ENST00000409486 CICQ96RK0 1608 aaPredicted RBP25.03■■□□□ 1.6
PPM1B-207ENST00000409486 RPS6KA4O75676 772 aa25.03■■□□□ 1.6
PPM1B-207ENST00000409486 POLD1P28340 1107 aa25.03■■□□□ 1.6
PPM1B-207ENST00000409486 RFC4P35249 363 aa25.03■■□□□ 1.6
PPM1B-207ENST00000409486 ARXQ96QS3 562 aa25.03■■□□□ 1.6
PPM1B-207ENST00000409486 STARD3NLO95772 234 aa25.02■■□□□ 1.6
PPM1B-207ENST00000409486 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
PPM1B-207ENST00000409486 VSIG10Q8N0Z9 540 aa25.02■■□□□ 1.6
PPM1B-207ENST00000409486 SLC16A10Q8TF71 515 aa25.02■■□□□ 1.6
PPM1B-207ENST00000409486 ARHGEF1Q92888 912 aaKnown RBP25.02■■□□□ 1.6
PPM1B-207ENST00000409486 C4AP0C0L4 1744 aa25.02■■□□□ 1.6
PPM1B-207ENST00000409486 SRP68Q9UHB9 627 aaKnown RBP25.01■■□□□ 1.59
PPM1B-207ENST00000409486 A1BGP04217 495 aa25■■□□□ 1.59
PPM1B-207ENST00000409486 USP16Q9Y5T5 823 aa25■■□□□ 1.59
PPM1B-207ENST00000409486 SNRPA1P09661 255 aaKnown RBP24.99■■□□□ 1.59
PPM1B-207ENST00000409486 TEX13AQ9BXU3 409 aaPredicted RBP24.97■■□□□ 1.59
PPM1B-207ENST00000409486 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
PPM1B-207ENST00000409486 SOS1Q07889 1333 aaPredicted RBP24.96■■□□□ 1.59
PPM1B-207ENST00000409486 COL15A1P39059 1388 aa24.96■■□□□ 1.59
PPM1B-207ENST00000409486 SGIP1Q9BQI5 828 aa24.96■■□□□ 1.59
PPM1B-207ENST00000409486 ADRA2BP18089 450 aa24.95■■□□□ 1.58
PPM1B-207ENST00000409486 NPM2Q86SE8 214 aaKnown RBP24.95■■□□□ 1.58
PPM1B-207ENST00000409486 NECTIN2Q92692 538 aa24.95■■□□□ 1.58
PPM1B-207ENST00000409486 FHDC1Q9C0D6 1143 aaPredicted RBP24.95■■□□□ 1.58
PPM1B-207ENST00000409486 ZPR1O75312 459 aa24.94■■□□□ 1.58
PPM1B-207ENST00000409486 NGEFQ8N5V2 710 aa24.94■■□□□ 1.58
PPM1B-207ENST00000409486 LAMB4A4D0S4 1761 aa24.94■■□□□ 1.58
PPM1B-207ENST00000409486 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
PPM1B-207ENST00000409486 USPL1Q5W0Q7 1092 aa24.93■■□□□ 1.58
PPM1B-207ENST00000409486 EIF2S2P20042 333 aaKnown RBP24.92■■□□□ 1.58
PPM1B-207ENST00000409486 MMP10P09238 476 aa24.91■■□□□ 1.58
PPM1B-207ENST00000409486 GYS1P13807 737 aa24.91■■□□□ 1.58
PPM1B-207ENST00000409486 TBC1D2BQ9UPU7 963 aa24.91■■□□□ 1.58
PPM1B-207ENST00000409486 USP42Q9H9J4 1324 aaKnown RBP24.91■■□□□ 1.58
PPM1B-207ENST00000409486 GIGYF1O75420 1035 aaPredicted RBP24.9■■□□□ 1.58
PPM1B-207ENST00000409486 MIER1Q8N108 512 aa24.9■■□□□ 1.58
PPM1B-207ENST00000409486 COL24A1Q17RW2 1714 aa24.9■■□□□ 1.58
PPM1B-207ENST00000409486 FKBP8Q14318 412 aa24.89■■□□□ 1.58
PPM1B-207ENST00000409486 MYL6BP14649 208 aa24.89■■□□□ 1.57
PPM1B-207ENST00000409486 BICDL1Q6ZP65 573 aa24.89■■□□□ 1.57
PPM1B-207ENST00000409486 MBIPQ9NS73 344 aa24.89■■□□□ 1.57
PPM1B-207ENST00000409486 CHL1O00533 1208 aa24.88■■□□□ 1.57
PPM1B-207ENST00000409486 EIF5P55010 431 aaKnown RBP24.87■■□□□ 1.57
PPM1B-207ENST00000409486 CALD1Q05682 793 aaKnown RBP24.87■■□□□ 1.57
PPM1B-207ENST00000409486 NBPF26B4DH59 902 aa24.86■■□□□ 1.57
PPM1B-207ENST00000409486 IL6STP40189 918 aaPredicted RBP24.86■■□□□ 1.57
PPM1B-207ENST00000409486 NBPF10Q6P3W6 841 aaKnown RBP24.86■■□□□ 1.57
PPM1B-207ENST00000409486 NLGN1Q8N2Q7 840 aa24.86■■□□□ 1.57
PPM1B-207ENST00000409486 NBPF15Q8N660 670 aa24.86■■□□□ 1.57
PPM1B-207ENST00000409486 CFAP44Q96MT7 982 aa24.86■■□□□ 1.57
PPM1B-207ENST00000409486 A0A087WZG4 1122 aa24.85■■□□□ 1.57
PPM1B-207ENST00000409486 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
PPM1B-207ENST00000409486 WWC1Q8IX03 1113 aa24.85■■□□□ 1.57
PPM1B-207ENST00000409486 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
PPM1B-207ENST00000409486 SYT17Q9BSW7 474 aa24.85■■□□□ 1.57
PPM1B-207ENST00000409486 NARFQ9UHQ1 456 aa24.85■■□□□ 1.57
PPM1B-207ENST00000409486 WWC3Q9ULE0 1092 aa24.85■■□□□ 1.57
PPM1B-207ENST00000409486 GNAI1P63096 354 aa24.84■■□□□ 1.57
PPM1B-207ENST00000409486 DZIP3Q86Y13 1208 aaKnown RBP24.84■■□□□ 1.57
PPM1B-207ENST00000409486 TSR2Q969E8 191 aaKnown RBP24.84■■□□□ 1.57
PPM1B-207ENST00000409486 IFT57Q9NWB7 429 aa24.84■■□□□ 1.57
PPM1B-207ENST00000409486 BABAM1Q9NWV8 329 aa24.84■■□□□ 1.57
PPM1B-207ENST00000409486 PARP3Q9Y6F1 533 aa24.84■■□□□ 1.57
PPM1B-207ENST00000409486 ANXA1P04083 346 aa24.83■■□□□ 1.57
PPM1B-207ENST00000409486 NLGN2Q8NFZ4 835 aa24.83■■□□□ 1.57
PPM1B-207ENST00000409486 CCER2I3L3R5 266 aa24.83■■□□□ 1.56
PPM1B-207ENST00000409486 BCL2L12Q9HB09 334 aa24.81■■□□□ 1.56
PPM1B-207ENST00000409486 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
PPM1B-207ENST00000409486 DDR1Q08345 913 aa24.8■■□□□ 1.56
PPM1B-207ENST00000409486 ZNF853P0CG23 659 aa24.79■■□□□ 1.56
PPM1B-207ENST00000409486 DUSP27Q5VZP5 1158 aa24.79■■□□□ 1.56
PPM1B-207ENST00000409486 NFIXQ14938 502 aa24.78■■□□□ 1.56
PPM1B-207ENST00000409486 CCDC27Q2M243 656 aa24.78■■□□□ 1.56
PPM1B-207ENST00000409486 PROSER3Q2NL68 480 aa24.78■■□□□ 1.56
PPM1B-207ENST00000409486 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
PPM1B-207ENST00000409486 BCORQ6W2J9 1755 aa24.77■■□□□ 1.56
PPM1B-207ENST00000409486 CAMTA2O94983 1202 aa24.77■■□□□ 1.56
PPM1B-207ENST00000409486 TBC1D9BQ66K14 1250 aa24.77■■□□□ 1.56
PPM1B-207ENST00000409486 AIMP1Q12904 312 aaKnown RBP24.77■■□□□ 1.56
PPM1B-207ENST00000409486 FAM177BA6PVY3 158 aa24.76■■□□□ 1.55
PPM1B-207ENST00000409486 NPHP1O15259 732 aa24.76■■□□□ 1.55
PPM1B-207ENST00000409486 KIF6Q6ZMV9 814 aa24.76■■□□□ 1.55
PPM1B-207ENST00000409486 TTLL7Q6ZT98 887 aa24.76■■□□□ 1.55
PPM1B-207ENST00000409486 ZBTB3Q9H5J0 574 aa24.76■■□□□ 1.55
PPM1B-207ENST00000409486 DCAF8L1A6NGE4 600 aa24.75■■□□□ 1.55
PPM1B-207ENST00000409486 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
PPM1B-207ENST00000409486 C8orf58Q8NAV2 365 aa24.75■■□□□ 1.55
PPM1B-207ENST00000409486 CHPF2Q9P2E5 772 aa24.75■■□□□ 1.55
PPM1B-207ENST00000409486 POLRMTO00411 1230 aaKnown RBP24.74■■□□□ 1.55
PPM1B-207ENST00000409486 AFDNP55196 1824 aaKnown RBP24.74■■□□□ 1.55
PPM1B-207ENST00000409486 TCERG1O14776 1098 aaKnown RBP24.73■■□□□ 1.55
PPM1B-207ENST00000409486 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
PPM1B-207ENST00000409486 TM4SF1P30408 202 aa24.72■■□□□ 1.55
PPM1B-207ENST00000409486 HLFQ16534 295 aa24.72■■□□□ 1.55
PPM1B-207ENST00000409486 TSPYL6Q8N831 410 aa24.72■■□□□ 1.55
PPM1B-207ENST00000409486 CD2APQ9Y5K6 639 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms