RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
LSM5-202ENST00000409292 G3V3G9 751 aa10.67□□□□□ -0.7
LSM5-202ENST00000409292 APLP1P51693 650 aa10.67□□□□□ -0.7
LSM5-202ENST00000409292 TGFB2P61812 414 aa10.67□□□□□ -0.7
LSM5-202ENST00000409292 TRAPPC3LQ5T215 181 aa10.67□□□□□ -0.7
LSM5-202ENST00000409292 C16orf71Q8IYS4 520 aaPredicted RBP10.67□□□□□ -0.7
LSM5-202ENST00000409292 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
LSM5-202ENST00000409292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
LSM5-202ENST00000409292 MMP10P09238 476 aa10.66□□□□□ -0.7
LSM5-202ENST00000409292 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
LSM5-202ENST00000409292 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
LSM5-202ENST00000409292 C4BP0C0L5 1744 aa10.66□□□□□ -0.7
LSM5-202ENST00000409292 ADCY9O60503 1353 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 WASHC2AQ641Q2 1341 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 SNPHO15079 494 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 RFC4P35249 363 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 BCS1LQ9Y276 419 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 PARP3Q9Y6F1 533 aa10.65□□□□□ -0.7
LSM5-202ENST00000409292 KIF20BQ96Q89 1820 aa10.65□□□□□ -0.71
LSM5-202ENST00000409292 TAF1LQ8IZX4 1826 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
LSM5-202ENST00000409292 TOMM70O94826 608 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 PHKG2P15735 406 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 ARHGAP27Q6ZUM4 889 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 UTRNP46939 3433 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 PLEKHG2Q9H7P9 1386 aa10.64□□□□□ -0.71
LSM5-202ENST00000409292 ERVV-2B6SEH9 535 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 FCHSD2O94868 740 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
LSM5-202ENST00000409292 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
LSM5-202ENST00000409292 EYA1Q99502 592 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 POLR3GLQ9BT43 218 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 ASAP1Q9ULH1 1129 aa10.63□□□□□ -0.71
LSM5-202ENST00000409292 CABP4P57796 275 aa10.62□□□□□ -0.71
LSM5-202ENST00000409292 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
LSM5-202ENST00000409292 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
LSM5-202ENST00000409292 DCAF5Q96JK2 942 aa10.62□□□□□ -0.71
LSM5-202ENST00000409292 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
LSM5-202ENST00000409292 ITGB4P16144 1822 aa10.62□□□□□ -0.71
LSM5-202ENST00000409292 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 KIF3CO14782 793 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 ITPK1Q13572 414 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 PIM2Q9P1W9 311 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 UBR3Q6ZT12 1888 aa10.61□□□□□ -0.71
LSM5-202ENST00000409292 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
LSM5-202ENST00000409292 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
LSM5-202ENST00000409292 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
LSM5-202ENST00000409292 TIMELESSQ9UNS1 1208 aa10.6□□□□□ -0.71
LSM5-202ENST00000409292 CNTNAP4Q9C0A0 1308 aa10.59□□□□□ -0.71
LSM5-202ENST00000409292 NCAPD2Q15021 1401 aa10.59□□□□□ -0.71
LSM5-202ENST00000409292 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
LSM5-202ENST00000409292 MTHFSP49914 203 aa10.59□□□□□ -0.71
LSM5-202ENST00000409292 DALRD3Q5D0E6 543 aaKnown RBP10.59□□□□□ -0.71
LSM5-202ENST00000409292 ZNF530Q6P9A1 599 aaPredicted RBP10.59□□□□□ -0.71
LSM5-202ENST00000409292 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
LSM5-202ENST00000409292 ARHGEF1Q92888 912 aaKnown RBP10.59□□□□□ -0.71
LSM5-202ENST00000409292 POLKQ9UBT6 870 aa10.59□□□□□ -0.71
LSM5-202ENST00000409292 DPEP1P16444 411 aa10.58□□□□□ -0.72
LSM5-202ENST00000409292 FSTL1Q12841 308 aa10.58□□□□□ -0.72
LSM5-202ENST00000409292 EIF4A2Q14240 407 aaKnown RBP10.58□□□□□ -0.72
LSM5-202ENST00000409292 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
LSM5-202ENST00000409292 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
LSM5-202ENST00000409292 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
LSM5-202ENST00000409292 PXDNLA1KZ92 1463 aa10.57□□□□□ -0.72
LSM5-202ENST00000409292 ZPR1O75312 459 aa10.57□□□□□ -0.72
LSM5-202ENST00000409292 GYS1P13807 737 aa10.57□□□□□ -0.72
LSM5-202ENST00000409292 C9orf131Q5VYM1 1079 aa10.57□□□□□ -0.72
LSM5-202ENST00000409292 CICQ96RK0 1608 aaPredicted RBP10.57□□□□□ -0.72
LSM5-202ENST00000409292 C10orf71Q711Q0 1435 aa10.57□□□□□ -0.72
LSM5-202ENST00000409292 ST18O60284 1047 aa10.56□□□□□ -0.72
LSM5-202ENST00000409292 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
LSM5-202ENST00000409292 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
LSM5-202ENST00000409292 KDRP35968 1356 aa10.55□□□□□ -0.72
LSM5-202ENST00000409292 MORC1Q86VD1 984 aa10.55□□□□□ -0.72
LSM5-202ENST00000409292 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
LSM5-202ENST00000409292 NMRK2Q9NPI5 230 aa10.55□□□□□ -0.72
LSM5-202ENST00000409292 RNF181Q9P0P0 153 aa10.55□□□□□ -0.72
LSM5-202ENST00000409292 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
LSM5-202ENST00000409292 SMC1BQ8NDV3 1235 aa10.54□□□□□ -0.72
LSM5-202ENST00000409292 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
LSM5-202ENST00000409292 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
LSM5-202ENST00000409292 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 ANKRD26Q9UPS8 1709 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 STK25O00506 426 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 EIF4G2P78344 907 aaKnown RBP eCLIP10.53□□□□□ -0.72
LSM5-202ENST00000409292 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
LSM5-202ENST00000409292 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
LSM5-202ENST00000409292 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 KIF13BQ9NQT8 1826 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 ZNF831Q5JPB2 1677 aa10.53□□□□□ -0.72
LSM5-202ENST00000409292 USP42Q9H9J4 1324 aaKnown RBP10.53□□□□□ -0.72
LSM5-202ENST00000409292 KLRG1Q96E93 195 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms