RNA–Protein interactions for RNA: ENST00000409053.1

RHBDD1-203, Transcript of rhomboid domain containing 1, humanhuman

TSL 4 BASIC

Gene RHBDD1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-203ENST00000409053 C5P01031 1676 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 ZBTB7AO95365 584 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 BABAM1Q9NWV8 329 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
RHBDD1-203ENST00000409053 NBPF26B4DH59 902 aa12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
RHBDD1-203ENST00000409053 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 TCERG1O14776 1098 aaKnown RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 STARD3NLO95772 234 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 ANXA1P04083 346 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 NGEFQ8N5V2 710 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 SRP68Q9UHB9 627 aaKnown RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 IL16Q14005 1332 aa12.07□□□□□ -0.48
RHBDD1-203ENST00000409053 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
RHBDD1-203ENST00000409053 MYL6BP14649 208 aa12.06□□□□□ -0.48
RHBDD1-203ENST00000409053 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
RHBDD1-203ENST00000409053 PROSER3Q2NL68 480 aa12.06□□□□□ -0.48
RHBDD1-203ENST00000409053 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
RHBDD1-203ENST00000409053 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
RHBDD1-203ENST00000409053 SSFA2P28290 1259 aa12.05□□□□□ -0.48
RHBDD1-203ENST00000409053 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
RHBDD1-203ENST00000409053 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
RHBDD1-203ENST00000409053 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
RHBDD1-203ENST00000409053 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 PDIA6Q15084 440 aa12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 ARXQ96QS3 562 aa12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
RHBDD1-203ENST00000409053 RFC4P35249 363 aa12.03□□□□□ -0.48
RHBDD1-203ENST00000409053 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
RHBDD1-203ENST00000409053 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
RHBDD1-203ENST00000409053 COL15A1P39059 1388 aa12.03□□□□□ -0.48
RHBDD1-203ENST00000409053 CASZ1Q86V15 1759 aa12.02□□□□□ -0.48
RHBDD1-203ENST00000409053 GYS1P13807 737 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 TWISTNBQ3B726 338 aaPredicted RBP12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 TTLL7Q6ZT98 887 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 FLAD1Q8NFF5 587 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 YTHDC1Q96MU7 727 aaKnown RBP12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.49
RHBDD1-203ENST00000409053 E9PSI1 815 aa12.01□□□□□ -0.49
RHBDD1-203ENST00000409053 VAMP4O75379 141 aa12.01□□□□□ -0.49
RHBDD1-203ENST00000409053 PTGER2P43116 358 aa12.01□□□□□ -0.49
RHBDD1-203ENST00000409053 FKBP8Q14318 412 aa12.01□□□□□ -0.49
RHBDD1-203ENST00000409053 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
RHBDD1-203ENST00000409053 CAMTA2O94983 1202 aa12□□□□□ -0.49
RHBDD1-203ENST00000409053 ADRA2BP18089 450 aa12□□□□□ -0.49
RHBDD1-203ENST00000409053 AIMP1Q12904 312 aaKnown RBP12□□□□□ -0.49
RHBDD1-203ENST00000409053 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
RHBDD1-203ENST00000409053 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
RHBDD1-203ENST00000409053 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
RHBDD1-203ENST00000409053 MTFR1LQ9H019 292 aa12□□□□□ -0.49
RHBDD1-203ENST00000409053 NARFQ9UHQ1 456 aa12□□□□□ -0.49
RHBDD1-203ENST00000409053 ZPR1O75312 459 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 HOXB7P09629 217 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 HLFQ16534 295 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 COPS6Q7L5N1 327 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
RHBDD1-203ENST00000409053 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
RHBDD1-203ENST00000409053 MMP10P09238 476 aa11.98□□□□□ -0.49
RHBDD1-203ENST00000409053 G2E3Q7L622 706 aa11.98□□□□□ -0.49
RHBDD1-203ENST00000409053 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
RHBDD1-203ENST00000409053 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
RHBDD1-203ENST00000409053 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
RHBDD1-203ENST00000409053 ZBED9Q6R2W3 1325 aa11.97□□□□□ -0.49
RHBDD1-203ENST00000409053 A0A087WZG4 1122 aa11.97□□□□□ -0.49
RHBDD1-203ENST00000409053 DDR1Q08345 913 aa11.97□□□□□ -0.49
RHBDD1-203ENST00000409053 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms