RNA–Protein interactions for RNA: ENST00000407218.5

MECP2-203, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-203ENST00000407218 CHL1O00533 1208 aa21.72■■□□□ 1.07
MECP2-203ENST00000407218 CYP19A1P11511 503 aaPredicted RBP21.72■■□□□ 1.07
MECP2-203ENST00000407218 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
MECP2-203ENST00000407218 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
MECP2-203ENST00000407218 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
MECP2-203ENST00000407218 SSFA2P28290 1259 aa21.71■■□□□ 1.07
MECP2-203ENST00000407218 KRT24Q2M2I5 525 aa21.71■■□□□ 1.07
MECP2-203ENST00000407218 CFAP44Q96MT7 982 aa21.71■■□□□ 1.07
MECP2-203ENST00000407218 MBIPQ9NS73 344 aa21.71■■□□□ 1.07
MECP2-203ENST00000407218 IFT57Q9NWB7 429 aa21.71■■□□□ 1.07
MECP2-203ENST00000407218 COL5A3P25940 1745 aaPredicted RBP21.7■■□□□ 1.06
MECP2-203ENST00000407218 STARD3NLO95772 234 aa21.7■■□□□ 1.06
MECP2-203ENST00000407218 CANXP27824 592 aaKnown RBP21.7■■□□□ 1.06
MECP2-203ENST00000407218 PIP4K2AP48426 406 aaPredicted RBP21.7■■□□□ 1.06
MECP2-203ENST00000407218 GNAI1P63096 354 aa21.7■■□□□ 1.06
MECP2-203ENST00000407218 TSR2Q969E8 191 aaKnown RBP21.7■■□□□ 1.06
MECP2-203ENST00000407218 CCDC87Q9NVE4 849 aa21.7■■□□□ 1.06
MECP2-203ENST00000407218 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
MECP2-203ENST00000407218 USP16Q9Y5T5 823 aa21.7■■□□□ 1.06
MECP2-203ENST00000407218 CNTNAP4Q9C0A0 1308 aa21.7■■□□□ 1.06
MECP2-203ENST00000407218 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
MECP2-203ENST00000407218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
MECP2-203ENST00000407218 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
MECP2-203ENST00000407218 BABAM1Q9NWV8 329 aa21.69■■□□□ 1.06
MECP2-203ENST00000407218 ZBTB1Q9Y2K1 713 aa21.69■■□□□ 1.06
MECP2-203ENST00000407218 RTCBQ9Y3I0 505 aaKnown RBP21.69■■□□□ 1.06
MECP2-203ENST00000407218 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
MECP2-203ENST00000407218 A1BGP04217 495 aa21.68■■□□□ 1.06
MECP2-203ENST00000407218 RC3H1Q5TC82 1133 aaKnown RBP21.68■■□□□ 1.06
MECP2-203ENST00000407218 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
MECP2-203ENST00000407218 GIGYF1O75420 1035 aaPredicted RBP21.67■■□□□ 1.06
MECP2-203ENST00000407218 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
MECP2-203ENST00000407218 TEX13AQ9BXU3 409 aaPredicted RBP21.67■■□□□ 1.06
MECP2-203ENST00000407218 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
MECP2-203ENST00000407218 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
MECP2-203ENST00000407218 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
MECP2-203ENST00000407218 RPS6KA4O75676 772 aa21.65■■□□□ 1.06
MECP2-203ENST00000407218 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
MECP2-203ENST00000407218 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
MECP2-203ENST00000407218 MSL1Q68DK7 614 aa21.65■■□□□ 1.06
MECP2-203ENST00000407218 WDR63Q8IWG1 891 aa21.65■■□□□ 1.06
MECP2-203ENST00000407218 YY1P25490 414 aa21.64■■□□□ 1.05
MECP2-203ENST00000407218 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.05
MECP2-203ENST00000407218 NGEFQ8N5V2 710 aa21.64■■□□□ 1.05
MECP2-203ENST00000407218 SPINK5Q9NQ38 1064 aaPredicted RBP21.64■■□□□ 1.05
MECP2-203ENST00000407218 IL16Q14005 1332 aa21.63■■□□□ 1.05
MECP2-203ENST00000407218 SOS1Q07889 1333 aaPredicted RBP21.62■■□□□ 1.05
MECP2-203ENST00000407218 ADRA2BP18089 450 aa21.62■■□□□ 1.05
MECP2-203ENST00000407218 DUSP27Q5VZP5 1158 aa21.62■■□□□ 1.05
MECP2-203ENST00000407218 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
MECP2-203ENST00000407218 FANCIQ9NVI1 1328 aa21.61■■□□□ 1.05
MECP2-203ENST00000407218 RFC4P35249 363 aa21.61■■□□□ 1.05
MECP2-203ENST00000407218 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
MECP2-203ENST00000407218 ZNF521Q96K83 1311 aa21.6■■□□□ 1.05
MECP2-203ENST00000407218 MYL6BP14649 208 aa21.6■■□□□ 1.05
MECP2-203ENST00000407218 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
MECP2-203ENST00000407218 C8orf58Q8NAV2 365 aa21.6■■□□□ 1.05
MECP2-203ENST00000407218 CD2APQ9Y5K6 639 aa21.6■■□□□ 1.05
MECP2-203ENST00000407218 COL15A1P39059 1388 aa21.6■■□□□ 1.05
MECP2-203ENST00000407218 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
MECP2-203ENST00000407218 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
MECP2-203ENST00000407218 NBPF26B4DH59 902 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 ANXA1P04083 346 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 GOLGA2Q08379 1002 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 HDGFL1Q5TGJ6 251 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 NBPF10Q6P3W6 841 aaKnown RBP21.58■■□□□ 1.05
MECP2-203ENST00000407218 KLHL34Q8N239 644 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 NBPF15Q8N660 670 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
MECP2-203ENST00000407218 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
MECP2-203ENST00000407218 TBC1D2BQ9UPU7 963 aa21.57■■□□□ 1.04
MECP2-203ENST00000407218 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
MECP2-203ENST00000407218 GPR162Q16538 588 aa21.56■■□□□ 1.04
MECP2-203ENST00000407218 PROSER3Q2NL68 480 aa21.56■■□□□ 1.04
MECP2-203ENST00000407218 NLGN2Q8NFZ4 835 aa21.56■■□□□ 1.04
MECP2-203ENST00000407218 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
MECP2-203ENST00000407218 ZPR1O75312 459 aa21.55■■□□□ 1.04
MECP2-203ENST00000407218 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
MECP2-203ENST00000407218 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
MECP2-203ENST00000407218 USPL1Q5W0Q7 1092 aa21.55■■□□□ 1.04
MECP2-203ENST00000407218 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
MECP2-203ENST00000407218 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
MECP2-203ENST00000407218 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
MECP2-203ENST00000407218 A0A087WZG4 1122 aa21.53■■□□□ 1.04
MECP2-203ENST00000407218 E9PSI1 815 aa21.53■■□□□ 1.04
MECP2-203ENST00000407218 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
MECP2-203ENST00000407218 DZIP3Q86Y13 1208 aaKnown RBP21.53■■□□□ 1.04
MECP2-203ENST00000407218 NLGN1Q8N2Q7 840 aa21.53■■□□□ 1.04
MECP2-203ENST00000407218 HOXB7P09629 217 aa21.52■■□□□ 1.04
MECP2-203ENST00000407218 GYS1P13807 737 aa21.52■■□□□ 1.04
MECP2-203ENST00000407218 SLFN5Q08AF3 891 aa21.51■■□□□ 1.03
MECP2-203ENST00000407218 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
MECP2-203ENST00000407218 FKBP8Q14318 412 aa21.51■■□□□ 1.03
MECP2-203ENST00000407218 PDIA6Q15084 440 aa21.51■■□□□ 1.03
MECP2-203ENST00000407218 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
MECP2-203ENST00000407218 GRIN3BO60391 1043 aa21.5■■□□□ 1.03
MECP2-203ENST00000407218 CHD4Q14839 1912 aa21.49■■□□□ 1.03
MECP2-203ENST00000407218 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
MECP2-203ENST00000407218 TTLL7Q6ZT98 887 aa21.49■■□□□ 1.03
MECP2-203ENST00000407218 ERBB4Q15303 1308 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms