RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 TAF1LQ8IZX4 1826 aa17.82■□□□□ 0.44
VPREB1-202ENST00000403807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
VPREB1-202ENST00000403807 PRAMEF22A3QJZ6 481 aa17.81■□□□□ 0.44
VPREB1-202ENST00000403807 PHF14O94880 888 aa17.81■□□□□ 0.44
VPREB1-202ENST00000403807 PDGFDQ9GZP0 370 aaPredicted RBP17.81■□□□□ 0.44
VPREB1-202ENST00000403807 UBR2Q8IWV8 1755 aa17.81■□□□□ 0.44
VPREB1-202ENST00000403807 ADRA2BP18089 450 aa17.8■□□□□ 0.44
VPREB1-202ENST00000403807 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
VPREB1-202ENST00000403807 A1BGP04217 495 aa17.79■□□□□ 0.44
VPREB1-202ENST00000403807 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
VPREB1-202ENST00000403807 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
VPREB1-202ENST00000403807 LRP5O75197 1615 aa17.79■□□□□ 0.44
VPREB1-202ENST00000403807 RFC4P35249 363 aa17.78■□□□□ 0.44
VPREB1-202ENST00000403807 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
VPREB1-202ENST00000403807 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
VPREB1-202ENST00000403807 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
VPREB1-202ENST00000403807 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
VPREB1-202ENST00000403807 TJP1Q07157 1748 aa17.78■□□□□ 0.44
VPREB1-202ENST00000403807 SRCAPQ6ZRS2 3230 aa17.77■□□□□ 0.44
VPREB1-202ENST00000403807 CICQ96RK0 1608 aaPredicted RBP17.77■□□□□ 0.44
VPREB1-202ENST00000403807 KDM3BQ7LBC6 1761 aa17.77■□□□□ 0.44
VPREB1-202ENST00000403807 ZBTB7AO95365 584 aa17.77■□□□□ 0.44
VPREB1-202ENST00000403807 IL6STP40189 918 aaPredicted RBP17.77■□□□□ 0.44
VPREB1-202ENST00000403807 SPON1Q9HCB6 807 aa17.77■□□□□ 0.44
VPREB1-202ENST00000403807 A0A087WZG4 1122 aa17.76■□□□□ 0.43
VPREB1-202ENST00000403807 HOXB7P09629 217 aa17.76■□□□□ 0.43
VPREB1-202ENST00000403807 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
VPREB1-202ENST00000403807 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
VPREB1-202ENST00000403807 COL5A3P25940 1745 aaPredicted RBP17.75■□□□□ 0.43
VPREB1-202ENST00000403807 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
VPREB1-202ENST00000403807 EIF5P55010 431 aaKnown RBP17.75■□□□□ 0.43
VPREB1-202ENST00000403807 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
VPREB1-202ENST00000403807 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
VPREB1-202ENST00000403807 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
VPREB1-202ENST00000403807 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
VPREB1-202ENST00000403807 ZPR1O75312 459 aa17.74■□□□□ 0.43
VPREB1-202ENST00000403807 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
VPREB1-202ENST00000403807 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
VPREB1-202ENST00000403807 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
VPREB1-202ENST00000403807 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
VPREB1-202ENST00000403807 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
VPREB1-202ENST00000403807 QSER1Q2KHR3 1735 aa17.73■□□□□ 0.43
VPREB1-202ENST00000403807 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 UBR3Q6ZT12 1888 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 COL15A1P39059 1388 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
VPREB1-202ENST00000403807 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
VPREB1-202ENST00000403807 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
VPREB1-202ENST00000403807 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 ARXQ96QS3 562 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
VPREB1-202ENST00000403807 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
VPREB1-202ENST00000403807 POLD1P28340 1107 aa17.71■□□□□ 0.43
VPREB1-202ENST00000403807 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPREB1-202ENST00000403807 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
VPREB1-202ENST00000403807 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
VPREB1-202ENST00000403807 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
VPREB1-202ENST00000403807 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.42
VPREB1-202ENST00000403807 E9PSI1 815 aa17.7■□□□□ 0.42
VPREB1-202ENST00000403807 MYL6BP14649 208 aa17.7■□□□□ 0.42
VPREB1-202ENST00000403807 CASZ1Q86V15 1759 aa17.7■□□□□ 0.42
VPREB1-202ENST00000403807 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
VPREB1-202ENST00000403807 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
VPREB1-202ENST00000403807 GYS1P13807 737 aa17.69■□□□□ 0.42
VPREB1-202ENST00000403807 USPL1Q5W0Q7 1092 aa17.69■□□□□ 0.42
VPREB1-202ENST00000403807 MSL1Q68DK7 614 aa17.69■□□□□ 0.42
VPREB1-202ENST00000403807 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
VPREB1-202ENST00000403807 SRP68Q9UHB9 627 aaKnown RBP17.69■□□□□ 0.42
VPREB1-202ENST00000403807 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
VPREB1-202ENST00000403807 PTGER2P43116 358 aa17.68■□□□□ 0.42
VPREB1-202ENST00000403807 PDIA6Q15084 440 aa17.68■□□□□ 0.42
VPREB1-202ENST00000403807 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
VPREB1-202ENST00000403807 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
VPREB1-202ENST00000403807 DDX21Q9NR30 783 aaKnown RBP eCLIP17.68■□□□□ 0.42
VPREB1-202ENST00000403807 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
VPREB1-202ENST00000403807 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
VPREB1-202ENST00000403807 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
VPREB1-202ENST00000403807 CCDC30Q5VVM6 783 aa17.67■□□□□ 0.42
VPREB1-202ENST00000403807 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
VPREB1-202ENST00000403807 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
VPREB1-202ENST00000403807 VAMP4O75379 141 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 ANXA1P04083 346 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 FKBP8Q14318 412 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 CHPF2Q9P2E5 772 aa17.65■□□□□ 0.42
VPREB1-202ENST00000403807 LAMB4A4D0S4 1761 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 ZNF652Q9Y2D9 606 aa17.64■□□□□ 0.41
VPREB1-202ENST00000403807 ERVV-1B6SEH8 477 aa17.63■□□□□ 0.41
VPREB1-202ENST00000403807 RGL2O15211 777 aa17.63■□□□□ 0.41
VPREB1-202ENST00000403807 MMP10P09238 476 aa17.63■□□□□ 0.41
VPREB1-202ENST00000403807 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
VPREB1-202ENST00000403807 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms