RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
PTCHD3P3-201ENST00000403073 TJP1Q07157 1748 aa22.37■■□□□ 1.17
PTCHD3P3-201ENST00000403073 IL16Q14005 1332 aa22.36■■□□□ 1.17
PTCHD3P3-201ENST00000403073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.36■■□□□ 1.17
PTCHD3P3-201ENST00000403073 MSH5O43196 834 aa22.36■■□□□ 1.17
PTCHD3P3-201ENST00000403073 A1BGP04217 495 aa22.36■■□□□ 1.17
PTCHD3P3-201ENST00000403073 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
PTCHD3P3-201ENST00000403073 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
PTCHD3P3-201ENST00000403073 CANXP27824 592 aaKnown RBP22.35■■□□□ 1.17
PTCHD3P3-201ENST00000403073 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
PTCHD3P3-201ENST00000403073 ZBTB1Q9Y2K1 713 aa22.35■■□□□ 1.17
PTCHD3P3-201ENST00000403073 KDM3BQ7LBC6 1761 aa22.35■■□□□ 1.17
PTCHD3P3-201ENST00000403073 TAF1LQ8IZX4 1826 aa22.34■■□□□ 1.17
PTCHD3P3-201ENST00000403073 SSFA2P28290 1259 aa22.34■■□□□ 1.17
PTCHD3P3-201ENST00000403073 TRAPPC3LQ5T215 181 aa22.34■■□□□ 1.17
PTCHD3P3-201ENST00000403073 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.17
PTCHD3P3-201ENST00000403073 FLAD1Q8NFF5 587 aa22.33■■□□□ 1.17
PTCHD3P3-201ENST00000403073 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
PTCHD3P3-201ENST00000403073 CICQ96RK0 1608 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 ELL2O00472 640 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 ZBTB7AO95365 584 aa22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 SOS1Q07889 1333 aaPredicted RBP22.31■■□□□ 1.16
PTCHD3P3-201ENST00000403073 HNRNPUQ00839 825 aaKnown RBP eCLIP22.3■■□□□ 1.16
PTCHD3P3-201ENST00000403073 DUSP27Q5VZP5 1158 aa22.3■■□□□ 1.16
PTCHD3P3-201ENST00000403073 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 ADRA2BP18089 450 aa22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 ZNF330Q9Y3S2 320 aaPredicted RBP22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
PTCHD3P3-201ENST00000403073 RFC4P35249 363 aa22.28■■□□□ 1.16
PTCHD3P3-201ENST00000403073 EIF5P55010 431 aaKnown RBP22.28■■□□□ 1.16
PTCHD3P3-201ENST00000403073 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
PTCHD3P3-201ENST00000403073 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
PTCHD3P3-201ENST00000403073 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
PTCHD3P3-201ENST00000403073 SLC16A10Q8TF71 515 aa22.27■■□□□ 1.16
PTCHD3P3-201ENST00000403073 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
PTCHD3P3-201ENST00000403073 MYH16Q9H6N6 1097 aa22.27■■□□□ 1.16
PTCHD3P3-201ENST00000403073 HOXB7P09629 217 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 MYL6BP14649 208 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 MSL1Q68DK7 614 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 ARXQ96QS3 562 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 SRP68Q9UHB9 627 aaKnown RBP22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 MYH14Q7Z406 1995 aaKnown RBP22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 COL15A1P39059 1388 aa22.25■■□□□ 1.15
PTCHD3P3-201ENST00000403073 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
PTCHD3P3-201ENST00000403073 PDIA6Q15084 440 aa22.24■■□□□ 1.15
PTCHD3P3-201ENST00000403073 HDGFL1Q5TGJ6 251 aa22.24■■□□□ 1.15
PTCHD3P3-201ENST00000403073 TBC1D2BQ9UPU7 963 aa22.24■■□□□ 1.15
PTCHD3P3-201ENST00000403073 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
PTCHD3P3-201ENST00000403073 CASZ1Q86V15 1759 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 E9PSI1 815 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 ANXA1P04083 346 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 PROSER3Q2NL68 480 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 SPON1Q9HCB6 807 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
PTCHD3P3-201ENST00000403073 A0A087WZG4 1122 aa22.22■■□□□ 1.15
PTCHD3P3-201ENST00000403073 TWISTNBQ3B726 338 aaPredicted RBP22.22■■□□□ 1.15
PTCHD3P3-201ENST00000403073 USPL1Q5W0Q7 1092 aa22.22■■□□□ 1.15
PTCHD3P3-201ENST00000403073 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
PTCHD3P3-201ENST00000403073 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
PTCHD3P3-201ENST00000403073 ZPR1O75312 459 aa22.21■■□□□ 1.15
PTCHD3P3-201ENST00000403073 GYS1P13807 737 aa22.21■■□□□ 1.15
PTCHD3P3-201ENST00000403073 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
PTCHD3P3-201ENST00000403073 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
PTCHD3P3-201ENST00000403073 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
PTCHD3P3-201ENST00000403073 CHPF2Q9P2E5 772 aa22.2■■□□□ 1.14
PTCHD3P3-201ENST00000403073 PTGER2P43116 358 aa22.19■■□□□ 1.14
PTCHD3P3-201ENST00000403073 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 VAMP4O75379 141 aa22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 FKBP8Q14318 412 aa22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 LRP10Q7Z4F1 713 aa22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 BCL2L12Q9HB09 334 aa22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 DDX21Q9NR30 783 aaKnown RBP eCLIP22.18■■□□□ 1.14
PTCHD3P3-201ENST00000403073 TTLL7Q6ZT98 887 aa22.17■■□□□ 1.14
PTCHD3P3-201ENST00000403073 NLGN1Q8N2Q7 840 aa22.17■■□□□ 1.14
PTCHD3P3-201ENST00000403073 SGIP1Q9BQI5 828 aa22.17■■□□□ 1.14
PTCHD3P3-201ENST00000403073 DBF4Q9UBU7 674 aaPredicted RBP22.17■■□□□ 1.14
PTCHD3P3-201ENST00000403073 LAMB4A4D0S4 1761 aa22.17■■□□□ 1.14
PTCHD3P3-201ENST00000403073 CAMTA2O94983 1202 aa22.16■■□□□ 1.14
PTCHD3P3-201ENST00000403073 CCDC30Q5VVM6 783 aa22.16■■□□□ 1.14
PTCHD3P3-201ENST00000403073 POLD1P28340 1107 aa22.15■■□□□ 1.14
PTCHD3P3-201ENST00000403073 COPS6Q7L5N1 327 aa22.15■■□□□ 1.14
PTCHD3P3-201ENST00000403073 ZBED9Q6R2W3 1325 aa22.14■■□□□ 1.14
PTCHD3P3-201ENST00000403073 AIMP1Q12904 312 aaKnown RBP22.14■■□□□ 1.13
PTCHD3P3-201ENST00000403073 XAGE3Q8WTP9 111 aa22.14■■□□□ 1.13
PTCHD3P3-201ENST00000403073 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.13
PTCHD3P3-201ENST00000403073 MMP10P09238 476 aa22.13■■□□□ 1.13
PTCHD3P3-201ENST00000403073 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
PTCHD3P3-201ENST00000403073 HLFQ16534 295 aa22.12■■□□□ 1.13
PTCHD3P3-201ENST00000403073 KIF6Q6ZMV9 814 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms