RNA–Protein interactions for RNA: ENST00000400830.3

ATAD3A-204, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-204ENST00000400830 SIK1P57059 783 aa23.39■■□□□ 1.33
ATAD3A-204ENST00000400830 MSL1Q68DK7 614 aa23.39■■□□□ 1.33
ATAD3A-204ENST00000400830 ATG3Q9NT62 314 aa23.39■■□□□ 1.33
ATAD3A-204ENST00000400830 POLD1P28340 1107 aa23.38■■□□□ 1.33
ATAD3A-204ENST00000400830 KLHL34Q8N239 644 aa23.38■■□□□ 1.33
ATAD3A-204ENST00000400830 C4BP0C0L5 1744 aa23.37■■□□□ 1.33
ATAD3A-204ENST00000400830 COL24A1Q17RW2 1714 aa23.37■■□□□ 1.33
ATAD3A-204ENST00000400830 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
ATAD3A-204ENST00000400830 EXOSC9Q06265 439 aaKnown RBP23.37■■□□□ 1.33
ATAD3A-204ENST00000400830 LINC00116Q8NCU8 138 aa23.37■■□□□ 1.33
ATAD3A-204ENST00000400830 ITPK1Q13572 414 aa23.36■■□□□ 1.33
ATAD3A-204ENST00000400830 AK7Q96M32 723 aa23.36■■□□□ 1.33
ATAD3A-204ENST00000400830 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
ATAD3A-204ENST00000400830 KDM3BQ7LBC6 1761 aa23.36■■□□□ 1.33
ATAD3A-204ENST00000400830 PTCD1O75127 700 aaKnown RBP23.34■■□□□ 1.33
ATAD3A-204ENST00000400830 ZNF496Q96IT1 587 aaPredicted RBP23.34■■□□□ 1.33
ATAD3A-204ENST00000400830 PHF14O94880 888 aa23.33■■□□□ 1.33
ATAD3A-204ENST00000400830 ATP6V1AP38606 617 aa23.33■■□□□ 1.33
ATAD3A-204ENST00000400830 C8orf58Q8NAV2 365 aa23.33■■□□□ 1.33
ATAD3A-204ENST00000400830 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
ATAD3A-204ENST00000400830 ELL2O00472 640 aaPredicted RBP23.32■■□□□ 1.32
ATAD3A-204ENST00000400830 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
ATAD3A-204ENST00000400830 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
ATAD3A-204ENST00000400830 TWISTNBQ3B726 338 aaPredicted RBP23.32■■□□□ 1.32
ATAD3A-204ENST00000400830 SLC4A9Q96Q91 983 aa23.32■■□□□ 1.32
ATAD3A-204ENST00000400830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.31■■□□□ 1.32
ATAD3A-204ENST00000400830 FLAD1Q8NFF5 587 aa23.31■■□□□ 1.32
ATAD3A-204ENST00000400830 SOS1Q07889 1333 aaPredicted RBP23.31■■□□□ 1.32
ATAD3A-204ENST00000400830 KCPQ6ZWJ8 1503 aa23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 SNRPA1P09661 255 aaKnown RBP23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 CT47B1P0C2W7 299 aaPredicted RBP23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 HMGB2P26583 209 aaKnown RBP23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 TSPYL6Q8N831 410 aa23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 NLGN2Q8NFZ4 835 aa23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
ATAD3A-204ENST00000400830 HEG1Q9ULI3 1381 aa23.29■■□□□ 1.32
ATAD3A-204ENST00000400830 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
ATAD3A-204ENST00000400830 HOXB7P09629 217 aa23.29■■□□□ 1.32
ATAD3A-204ENST00000400830 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
ATAD3A-204ENST00000400830 GOLGB1Q14789 3259 aaKnown RBP23.28■■□□□ 1.32
ATAD3A-204ENST00000400830 GNPATO15228 680 aa23.28■■□□□ 1.32
ATAD3A-204ENST00000400830 CHMP4AQ9BY43 222 aa23.28■■□□□ 1.32
ATAD3A-204ENST00000400830 VAMP4O75379 141 aa23.27■■□□□ 1.32
ATAD3A-204ENST00000400830 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
ATAD3A-204ENST00000400830 SSFA2P28290 1259 aa23.26■■□□□ 1.31
ATAD3A-204ENST00000400830 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
ATAD3A-204ENST00000400830 ZNF428Q96B54 188 aa23.25■■□□□ 1.31
ATAD3A-204ENST00000400830 PRAMEF22A3QJZ6 481 aa23.23■■□□□ 1.31
ATAD3A-204ENST00000400830 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
ATAD3A-204ENST00000400830 GPR162Q16538 588 aa23.23■■□□□ 1.31
ATAD3A-204ENST00000400830 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
ATAD3A-204ENST00000400830 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
ATAD3A-204ENST00000400830 CCDC30Q5VVM6 783 aa23.22■■□□□ 1.31
ATAD3A-204ENST00000400830 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
ATAD3A-204ENST00000400830 RCAN3Q9UKA8 241 aa23.22■■□□□ 1.31
ATAD3A-204ENST00000400830 STARD3NLO95772 234 aa23.21■■□□□ 1.31
ATAD3A-204ENST00000400830 NECTIN2Q92692 538 aa23.21■■□□□ 1.31
ATAD3A-204ENST00000400830 USP16Q9Y5T5 823 aa23.21■■□□□ 1.31
ATAD3A-204ENST00000400830 STK31Q9BXU1 1019 aa23.2■■□□□ 1.3
ATAD3A-204ENST00000400830 RARSP54136 660 aaKnown RBP23.19■■□□□ 1.3
ATAD3A-204ENST00000400830 ALDH1L2Q3SY69 923 aa23.19■■□□□ 1.3
ATAD3A-204ENST00000400830 RTCBQ9Y3I0 505 aaKnown RBP23.19■■□□□ 1.3
ATAD3A-204ENST00000400830 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
ATAD3A-204ENST00000400830 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
ATAD3A-204ENST00000400830 RC3H1Q5TC82 1133 aaKnown RBP23.18■■□□□ 1.3
ATAD3A-204ENST00000400830 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
ATAD3A-204ENST00000400830 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
ATAD3A-204ENST00000400830 CYP19A1P11511 503 aaPredicted RBP23.17■■□□□ 1.3
ATAD3A-204ENST00000400830 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
ATAD3A-204ENST00000400830 SMC4Q9NTJ3 1288 aa23.17■■□□□ 1.3
ATAD3A-204ENST00000400830 YBX3P16989 372 aaKnown RBP eCLIP23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 TRAPPC3LQ5T215 181 aa23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 DBF4Q9UBU7 674 aaPredicted RBP23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 CD2APQ9Y5K6 639 aa23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 CHD4Q14839 1912 aa23.16■■□□□ 1.3
ATAD3A-204ENST00000400830 ERBB4Q15303 1308 aa23.15■■□□□ 1.3
ATAD3A-204ENST00000400830 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
ATAD3A-204ENST00000400830 TJP1Q07157 1748 aa23.14■■□□□ 1.3
ATAD3A-204ENST00000400830 RPS6KA4O75676 772 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 A1BGP04217 495 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 CHPF2Q9P2E5 772 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 CICQ96RK0 1608 aaPredicted RBP23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 LAMB4A4D0S4 1761 aa23.14■■□□□ 1.29
ATAD3A-204ENST00000400830 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
ATAD3A-204ENST00000400830 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
ATAD3A-204ENST00000400830 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
ATAD3A-204ENST00000400830 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
ATAD3A-204ENST00000400830 BCAR3O75815 825 aa23.12■■□□□ 1.29
ATAD3A-204ENST00000400830 MMP10P09238 476 aa23.12■■□□□ 1.29
ATAD3A-204ENST00000400830 MYL6BP14649 208 aa23.11■■□□□ 1.29
ATAD3A-204ENST00000400830 ADRA2BP18089 450 aa23.11■■□□□ 1.29
ATAD3A-204ENST00000400830 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
ATAD3A-204ENST00000400830 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
ATAD3A-204ENST00000400830 RFC4P35249 363 aa23.1■■□□□ 1.29
ATAD3A-204ENST00000400830 PDIA6Q15084 440 aa23.1■■□□□ 1.29
ATAD3A-204ENST00000400830 WWC3Q9ULE0 1092 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms