RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 ZNF853P0CG23 659 aa7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 IL2RBP14784 551 aa7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 IRX5P78411 483 aaPredicted RBP7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 ZNF530Q6P9A1 599 aaPredicted RBP7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 THUMPD2Q9BTF0 503 aaKnown RBP7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 SPG7Q9UQ90 795 aa7.16□□□□□ -1.26
SAMSN1-203ENST00000400566 GNAI1P63096 354 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 DCTN1Q14203 1278 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 C1orf141Q5JVX7 400 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 MCM10Q7L590 875 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 UNC5CLQ8IV45 518 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 IL17REQ8NFR9 667 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 NGLY1Q96IV0 654 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 CFAP44Q96MT7 982 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 C8orf37Q96NL8 207 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 THRAP3Q9Y2W1 955 aaKnown RBP7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 SPATA31A1Q5TZJ5 1347 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 SPATA31A5Q5VU36 1347 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 SPATA31A7Q8IWB4 1347 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 FANCIQ9NVI1 1328 aa7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 SIPA1L3O60292 1781 aaPredicted RBP7.15□□□□□ -1.26
SAMSN1-203ENST00000400566 PDCD7Q8N8D1 485 aaKnown RBP7.15□□□□□ -1.27
SAMSN1-203ENST00000400566 CDCA7Q9BWT1 371 aaPredicted RBP7.15□□□□□ -1.27
SAMSN1-203ENST00000400566 PCDH11XQ9BZA7 1347 aa7.15□□□□□ -1.27
SAMSN1-203ENST00000400566 PCDH11YQ9BZA8 1340 aa7.15□□□□□ -1.27
SAMSN1-203ENST00000400566 CHL1O00533 1208 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 CYP27B1O15528 508 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 PHKG2P15735 406 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 VPS72Q15906 364 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 IFNL2Q8IZJ0 200 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 ZCRB1Q8TBF4 217 aaKnown RBP7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 FBXO41Q8TF61 875 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 BABAM1Q9NWV8 329 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 USP35Q9P2H5 1018 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 MRC1P22897 1456 aa7.14□□□□□ -1.27
SAMSN1-203ENST00000400566 PPP1R37O75864 691 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 HSP90AB1P08238 724 aaKnown RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 CT47B1P0C2W7 299 aaPredicted RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 TSR2Q969E8 191 aaKnown RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 RNF123Q5XPI4 1314 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 KDM3BQ7LBC6 1761 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 KDM6AO15550 1401 aaPredicted RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 RNMTO43148 476 aaKnown RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 MEX3CQ5U5Q3 659 aaKnown RBP7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 MPRIPQ6WCQ1 1025 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 DCAF5Q96JK2 942 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 USP21Q9UK80 565 aa7.13□□□□□ -1.27
SAMSN1-203ENST00000400566 EXOSC9Q06265 439 aaKnown RBP7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 TAF7Q15545 349 aaPredicted RBP7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 DPY19L2Q6NUT2 758 aa7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 OCEL1Q9H607 264 aa7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 LAS1LQ9Y4W2 734 aaKnown RBP7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 SUPT16HQ9Y5B9 1047 aaKnown RBP7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 AFF2P51816 1311 aa7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 KAT6BQ8WYB5 2073 aa7.12□□□□□ -1.27
SAMSN1-203ENST00000400566 TEFQ10587 303 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 ZNF428Q96B54 188 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 RYDENQ9NUL5 291 aaKnown RBP7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 ATRNO75882 1429 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 GLI3P10071 1580 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 THSD7AQ9UPZ6 1657 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 TOGARAM1Q9Y4F4 1720 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 CACNA1FO60840 1977 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 SLC52A2Q9HAB3 445 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 TSPYL4Q9UJ04 414 aa7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 CCDC9Q9Y3X0 531 aaKnown RBP7.11□□□□□ -1.27
SAMSN1-203ENST00000400566 ITGB4P16144 1822 aa7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 SOS1Q07889 1333 aaPredicted RBP7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 EXOC5O00471 708 aa7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 RARSP54136 660 aaKnown RBP7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 DDB1Q16531 1140 aa7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 DDX54Q8TDD1 881 aaKnown RBP7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 TRPC5Q9UL62 973 aaPredicted RBP7.1□□□□□ -1.27
SAMSN1-203ENST00000400566 ERVV-2B6SEH9 535 aa7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 TSPYL6Q8N831 410 aa7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 C8orf58Q8NAV2 365 aa7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 GJD4Q96KN9 370 aaPredicted RBP7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 MIS18AQ9NYP9 233 aa7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 UBR2Q8IWV8 1755 aa7.09□□□□□ -1.27
SAMSN1-203ENST00000400566 BTBD11A6QL63 1104 aa7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 ONECUT3O60422 494 aaPredicted RBP7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 VAMP4O75379 141 aa7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 RRP1P56182 461 aaKnown RBP7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 FAM98CQ17RN3 349 aaKnown RBP7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 TWISTNBQ3B726 338 aaPredicted RBP7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 ALDH1L2Q3SY69 923 aa7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 PAPPAQ13219 1627 aa7.09□□□□□ -1.28
SAMSN1-203ENST00000400566 DOT1LQ8TEK3 1739 aa7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 HEG1Q9ULI3 1381 aa7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 HOXB7P09629 217 aa7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 BRPF1P55201 1214 aaPredicted RBP7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 CABP4P57796 275 aa7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 EIF4A1P60842 406 aaKnown RBP7.08□□□□□ -1.28
SAMSN1-203ENST00000400566 TSHZ2Q9NRE2 1034 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms