RNA–Protein interactions for RNA: ENST00000400246.5

DEPDC5-204, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-204ENST00000400246 TPM1P09493 284 aa11.21□□□□□ -0.62
DEPDC5-204ENST00000400246 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.62
DEPDC5-204ENST00000400246 CHMLP26374 656 aa11.21□□□□□ -0.62
DEPDC5-204ENST00000400246 MCM2P49736 904 aa11.21□□□□□ -0.62
DEPDC5-204ENST00000400246 PDCL2Q8N4E4 241 aa11.21□□□□□ -0.62
DEPDC5-204ENST00000400246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.21□□□□□ -0.629e-11■■■■■ 86.5
DEPDC5-204ENST00000400246 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 CPLX1O14810 134 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 ATP7AQ04656 1500 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 SPHKAPQ2M3C7 1700 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 HMGB2P26583 209 aaKnown RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 TRIM5Q9C035 493 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 CCDC183Q5T5S1 534 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 ABCC1P33527 1531 aa11.2□□□□□ -0.62
DEPDC5-204ENST00000400246 U2AF2P26368 475 aaKnown RBP eCLIP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 MTERF4Q7Z6M4 381 aaKnown RBP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 SRGAP3O43295 1099 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 EIF4A2Q14240 407 aaKnown RBP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 V9GYY5 206 aaPredicted RBP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 STX6O43752 255 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 SYT1P21579 422 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 MCM5P33992 734 aa11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
DEPDC5-204ENST00000400246 IBTKQ9P2D0 1353 aaPredicted RBP11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 IL25Q9H293 177 aa11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 AK2P54819 239 aa11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 CLEC17AQ6ZS10 378 aa11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 FLIIQ13045 1269 aa11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
DEPDC5-204ENST00000400246 PTGS1P23219 599 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 CCT4P50991 539 aaKnown RBP11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 PYCARDQ9ULZ3 195 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 MYOM2P54296 1465 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 GNAI3P08754 354 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 ZNF853P0CG23 659 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 GJB2P29033 226 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 LUZP1Q86V48 1076 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 ZSCAN22P10073 491 aaPredicted RBP11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
DEPDC5-204ENST00000400246 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 LRMPQ12912 555 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 LARP1BQ659C4 914 aaKnown RBP11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 USHBP1Q8N6Y0 703 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 ZFYVE16Q7Z3T8 1539 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 HDGFL1Q5TGJ6 251 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 CCDC186Q7Z3E2 898 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 CT47A1Q5JQC4 288 aaPredicted RBP11.16□□□□□ -0.62
DEPDC5-204ENST00000400246 NAA30Q147X3 362 aaPredicted RBP11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 FILIP1Q7Z7B0 1213 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 WDHD1O75717 1129 aaPredicted RBP11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 SIL1Q9H173 461 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 KDM4AO75164 1064 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 TERF1P54274 439 aa11.15□□□□□ -0.62
DEPDC5-204ENST00000400246 CCDC192P0DO97 292 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 UBE2HP62256 183 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 ATP2B3Q16720 1220 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 ZBTB9Q96C00 473 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 LIMCH1Q9UPQ0 1083 aa11.15□□□□□ -0.63
DEPDC5-204ENST00000400246 CHL1O00533 1208 aa11.14□□□□□ -0.63
DEPDC5-204ENST00000400246 LARGE1O95461 756 aa11.14□□□□□ -0.63
DEPDC5-204ENST00000400246 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
DEPDC5-204ENST00000400246 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
DEPDC5-204ENST00000400246 TRMT1Q9NXH9 659 aaKnown RBP11.14□□□□□ -0.63
DEPDC5-204ENST00000400246 KIF1BO60333 1816 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms