RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
CSNK2A1-204ENST00000400227 BACH1O14867 736 aa9.89□□□□□ -0.83
CSNK2A1-204ENST00000400227 TLR1Q15399 786 aa9.89□□□□□ -0.83
CSNK2A1-204ENST00000400227 CFAP43Q8NDM7 1665 aa9.88□□□□□ -0.83
CSNK2A1-204ENST00000400227 SMTNP53814 917 aa9.88□□□□□ -0.83
CSNK2A1-204ENST00000400227 LYSMD3Q7Z3D4 306 aa9.88□□□□□ -0.83
CSNK2A1-204ENST00000400227 ANKMY2Q8IV38 441 aa9.88□□□□□ -0.83
CSNK2A1-204ENST00000400227 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
CSNK2A1-204ENST00000400227 WDR97A6NE52 1622 aa9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 M0R2N6 131 aa9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 ARID3AQ99856 593 aa9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 CUL7Q14999 1698 aa9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
CSNK2A1-204ENST00000400227 POLA1P09884 1462 aaPredicted RBP9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 RAD54L2Q9Y4B4 1467 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 ATG7O95352 703 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 DPYDQ12882 1025 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 MTFR1Q15390 333 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 PRICKLE2Q7Z3G6 844 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 ARXQ96QS3 562 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 CTTNBP2Q8WZ74 1663 aa9.86□□□□□ -0.83
CSNK2A1-204ENST00000400227 NESP48681 1621 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 A6NJY4 79 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 SFI1A8K8P3 1242 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 SPATA31C2B4DYI2 1134 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 SEC13P55735 322 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 ELOAQ14241 798 aaKnown RBP9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 EPHA4P54764 986 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 NOVA2Q9UNW9 492 aaKnown RBP9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
CSNK2A1-204ENST00000400227 PCF11O94913 1555 aaKnown RBP9.84□□□□□ -0.83
CSNK2A1-204ENST00000400227 GTF2E1P29083 439 aaPredicted RBP9.84□□□□□ -0.83
CSNK2A1-204ENST00000400227 TMEM214Q6NUQ4 689 aaKnown RBP9.84□□□□□ -0.83
CSNK2A1-204ENST00000400227 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 PTSQ03393 145 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 POU4F2Q12837 409 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 WDR44Q5JSH3 913 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 TSEN2Q8NCE0 465 aaKnown RBP9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 SCHIP1Q9P0W5 487 aaPredicted RBP9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 ZMIZ1Q9ULJ6 1067 aa9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 IQSEC3Q9UPP2 1182 aaPredicted RBP9.83□□□□□ -0.84
CSNK2A1-204ENST00000400227 URB2Q14146 1524 aaKnown RBP9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 CENPBP07199 599 aaPredicted RBP9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 RHOQP17081 205 aa9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 FOXK2Q01167 660 aa9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 GNASQ5JWF2 1037 aa9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 TAS1R3Q7RTX0 852 aa9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 RHBDD1Q8TEB9 315 aa9.82□□□□□ -0.84
CSNK2A1-204ENST00000400227 ABCA5Q8WWZ7 1642 aa9.81□□□□□ -0.84
CSNK2A1-204ENST00000400227 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.849e-8■■■□□ 18.2
CSNK2A1-204ENST00000400227 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
CSNK2A1-204ENST00000400227 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
CSNK2A1-204ENST00000400227 ZNF295-AS1Q8N0V1 137 aa9.8□□□□□ -0.84
CSNK2A1-204ENST00000400227 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
CSNK2A1-204ENST00000400227 SLC35F4A4IF30 521 aa9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 STK32AQ8WU08 396 aa9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 NIFKQ9BYG3 293 aaKnown RBP9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 NXF1Q9UBU9 619 aaKnown RBP9.79□□□□□ -0.84
CSNK2A1-204ENST00000400227 PHLDB1Q86UU1 1377 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 PHKA2P46019 1235 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 HINFPQ9BQA5 517 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 TSPAN10Q9H1Z9 355 aaPredicted RBP9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 TIMMDC1Q9NPL8 285 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 FHOD3Q2V2M9 1422 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 CASKIN1Q8WXD9 1431 aa9.78□□□□□ -0.84
CSNK2A1-204ENST00000400227 TMEM164Q5U3C3 297 aa9.77□□□□□ -0.85
CSNK2A1-204ENST00000400227 NPAS3Q8IXF0 933 aa9.77□□□□□ -0.85
CSNK2A1-204ENST00000400227 DYRK1BQ9Y463 629 aa9.77□□□□□ -0.85
CSNK2A1-204ENST00000400227 KIF21AQ7Z4S6 1674 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 SAMD9Q5K651 1589 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 FAM69CQ0P6D2 419 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 TBCELQ5QJ74 424 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 CABP1Q9NZU7 370 aa9.76□□□□□ -0.85
CSNK2A1-204ENST00000400227 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 PLA2G4AP47712 749 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 TEAD4Q15561 434 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 LRRIQ1Q96JM4 1722 aa9.75□□□□□ -0.85
CSNK2A1-204ENST00000400227 A0A1B0GTH6 734 aa9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 TERTO14746 1132 aaKnown RBP9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 C21orf2O43822 256 aa9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 ZDHHC1Q8WTX9 485 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms