RNA–Protein interactions for RNA: ENST00000400100.5

SNRPN-205, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-205ENST00000400100 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
SNRPN-205ENST00000400100 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
SNRPN-205ENST00000400100 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
SNRPN-205ENST00000400100 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
SNRPN-205ENST00000400100 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
SNRPN-205ENST00000400100 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-205ENST00000400100 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-205ENST00000400100 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
SNRPN-205ENST00000400100 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
SNRPN-205ENST00000400100 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
SNRPN-205ENST00000400100 STARD3NLO95772 234 aa17.19■□□□□ 0.34
SNRPN-205ENST00000400100 ADRA2BP18089 450 aa17.19■□□□□ 0.34
SNRPN-205ENST00000400100 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
SNRPN-205ENST00000400100 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
SNRPN-205ENST00000400100 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
SNRPN-205ENST00000400100 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
SNRPN-205ENST00000400100 C4AP0C0L4 1744 aa17.18■□□□□ 0.34
SNRPN-205ENST00000400100 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
SNRPN-205ENST00000400100 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
SNRPN-205ENST00000400100 MMP10P09238 476 aa17.17■□□□□ 0.34
SNRPN-205ENST00000400100 GYS1P13807 737 aa17.17■□□□□ 0.34
SNRPN-205ENST00000400100 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
SNRPN-205ENST00000400100 NLGN2Q8NFZ4 835 aa17.17■□□□□ 0.34
SNRPN-205ENST00000400100 A1BGP04217 495 aa17.16■□□□□ 0.34
SNRPN-205ENST00000400100 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-205ENST00000400100 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
SNRPN-205ENST00000400100 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-205ENST00000400100 ZPR1O75312 459 aa17.15■□□□□ 0.34
SNRPN-205ENST00000400100 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
SNRPN-205ENST00000400100 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
SNRPN-205ENST00000400100 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
SNRPN-205ENST00000400100 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
SNRPN-205ENST00000400100 COL15A1P39059 1388 aa17.14■□□□□ 0.34
SNRPN-205ENST00000400100 SNRPA1P09661 255 aaKnown RBP17.14■□□□□ 0.33
SNRPN-205ENST00000400100 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
SNRPN-205ENST00000400100 FKBP8Q14318 412 aa17.14■□□□□ 0.33
SNRPN-205ENST00000400100 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
SNRPN-205ENST00000400100 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
SNRPN-205ENST00000400100 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
SNRPN-205ENST00000400100 APAF1O14727 1248 aa17.12■□□□□ 0.33
SNRPN-205ENST00000400100 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
SNRPN-205ENST00000400100 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
SNRPN-205ENST00000400100 GPR162Q16538 588 aa17.11■□□□□ 0.33
SNRPN-205ENST00000400100 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
SNRPN-205ENST00000400100 TBC1D2BQ9UPU7 963 aa17.11■□□□□ 0.33
SNRPN-205ENST00000400100 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
SNRPN-205ENST00000400100 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
SNRPN-205ENST00000400100 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
SNRPN-205ENST00000400100 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
SNRPN-205ENST00000400100 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
SNRPN-205ENST00000400100 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
SNRPN-205ENST00000400100 IL6STP40189 918 aaPredicted RBP17.09■□□□□ 0.33
SNRPN-205ENST00000400100 BICDL1Q6ZP65 573 aa17.09■□□□□ 0.33
SNRPN-205ENST00000400100 CD2APQ9Y5K6 639 aa17.09■□□□□ 0.33
SNRPN-205ENST00000400100 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.33
SNRPN-205ENST00000400100 NGEFQ8N5V2 710 aa17.08■□□□□ 0.33
SNRPN-205ENST00000400100 A0A087WZG4 1122 aa17.07■□□□□ 0.32
SNRPN-205ENST00000400100 DDR1Q08345 913 aa17.07■□□□□ 0.32
SNRPN-205ENST00000400100 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
SNRPN-205ENST00000400100 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
SNRPN-205ENST00000400100 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
SNRPN-205ENST00000400100 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
SNRPN-205ENST00000400100 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
SNRPN-205ENST00000400100 MYL6BP14649 208 aa17.05■□□□□ 0.32
SNRPN-205ENST00000400100 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
SNRPN-205ENST00000400100 NFIXQ14938 502 aa17.05■□□□□ 0.32
SNRPN-205ENST00000400100 FAM9BQ8IZU0 186 aa17.05■□□□□ 0.32
SNRPN-205ENST00000400100 NECTIN2Q92692 538 aa17.05■□□□□ 0.32
SNRPN-205ENST00000400100 TM4SF1P30408 202 aa17.05■□□□□ 0.32
SNRPN-205ENST00000400100 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
SNRPN-205ENST00000400100 POLRMTO00411 1230 aaKnown RBP17.04■□□□□ 0.32
SNRPN-205ENST00000400100 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
SNRPN-205ENST00000400100 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
SNRPN-205ENST00000400100 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
SNRPN-205ENST00000400100 CHL1O00533 1208 aa17.03■□□□□ 0.32
SNRPN-205ENST00000400100 YBX3P16989 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNRPN-205ENST00000400100 TBC1D9BQ66K14 1250 aa17.03■□□□□ 0.32
SNRPN-205ENST00000400100 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
SNRPN-205ENST00000400100 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.31
SNRPN-205ENST00000400100 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.31
SNRPN-205ENST00000400100 SERPINB2P05120 415 aa17.01■□□□□ 0.31
SNRPN-205ENST00000400100 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
SNRPN-205ENST00000400100 SCN7AQ01118 1682 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 NPHP1O15259 732 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 YY1P25490 414 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 CFAP44Q96MT7 982 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 MBIPQ9NS73 344 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 ANXA1P04083 346 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 DPEP1P16444 411 aa17■□□□□ 0.31
SNRPN-205ENST00000400100 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
SNRPN-205ENST00000400100 SETDB2Q96T68 719 aa16.99■□□□□ 0.31
SNRPN-205ENST00000400100 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
SNRPN-205ENST00000400100 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
SNRPN-205ENST00000400100 CHRNA5P30532 468 aa16.98■□□□□ 0.31
SNRPN-205ENST00000400100 TGFB2P61812 414 aa16.98■□□□□ 0.31
SNRPN-205ENST00000400100 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
SNRPN-205ENST00000400100 FAM177BA6PVY3 158 aa16.97■□□□□ 0.31
SNRPN-205ENST00000400100 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
SNRPN-205ENST00000400100 HLFQ16534 295 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms