RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 RFC4P35249 363 aa16.83■□□□□ 0.28
VPREB3-202ENST00000398465 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
VPREB3-202ENST00000398465 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
VPREB3-202ENST00000398465 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
VPREB3-202ENST00000398465 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
VPREB3-202ENST00000398465 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
VPREB3-202ENST00000398465 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
VPREB3-202ENST00000398465 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
VPREB3-202ENST00000398465 ADAMTS8Q9UP79 889 aa16.82■□□□□ 0.28
VPREB3-202ENST00000398465 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
VPREB3-202ENST00000398465 CHD4Q14839 1912 aa16.81■□□□□ 0.28
VPREB3-202ENST00000398465 GYS1P13807 737 aa16.81■□□□□ 0.28
VPREB3-202ENST00000398465 RIPK4P57078 832 aa16.81■□□□□ 0.28
VPREB3-202ENST00000398465 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
VPREB3-202ENST00000398465 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
VPREB3-202ENST00000398465 C10orf71Q711Q0 1435 aa16.8■□□□□ 0.28
VPREB3-202ENST00000398465 KCNQ3O43525 872 aa16.8■□□□□ 0.28
VPREB3-202ENST00000398465 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
VPREB3-202ENST00000398465 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
VPREB3-202ENST00000398465 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
VPREB3-202ENST00000398465 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
VPREB3-202ENST00000398465 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
VPREB3-202ENST00000398465 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
VPREB3-202ENST00000398465 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
VPREB3-202ENST00000398465 A0A087WZG4 1122 aa16.77■□□□□ 0.28
VPREB3-202ENST00000398465 MMP10P09238 476 aa16.77■□□□□ 0.28
VPREB3-202ENST00000398465 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
VPREB3-202ENST00000398465 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
VPREB3-202ENST00000398465 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
VPREB3-202ENST00000398465 ZPR1O75312 459 aa16.76■□□□□ 0.27
VPREB3-202ENST00000398465 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
VPREB3-202ENST00000398465 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
VPREB3-202ENST00000398465 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
VPREB3-202ENST00000398465 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
VPREB3-202ENST00000398465 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
VPREB3-202ENST00000398465 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
VPREB3-202ENST00000398465 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
VPREB3-202ENST00000398465 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
VPREB3-202ENST00000398465 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
VPREB3-202ENST00000398465 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
VPREB3-202ENST00000398465 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
VPREB3-202ENST00000398465 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 GOLGB1Q14789 3259 aaKnown RBP16.73■□□□□ 0.27
VPREB3-202ENST00000398465 NUP98P52948 1817 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 GIGYF1O75420 1035 aaPredicted RBP16.73■□□□□ 0.27
VPREB3-202ENST00000398465 FKBP8Q14318 412 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
VPREB3-202ENST00000398465 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
VPREB3-202ENST00000398465 UTRNP46939 3433 aa16.72■□□□□ 0.27
VPREB3-202ENST00000398465 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
VPREB3-202ENST00000398465 A1BGP04217 495 aa16.72■□□□□ 0.27
VPREB3-202ENST00000398465 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
VPREB3-202ENST00000398465 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
VPREB3-202ENST00000398465 APAF1O14727 1248 aa16.71■□□□□ 0.27
VPREB3-202ENST00000398465 RGL2O15211 777 aa16.71■□□□□ 0.27
VPREB3-202ENST00000398465 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
VPREB3-202ENST00000398465 DDR1Q08345 913 aa16.7■□□□□ 0.26
VPREB3-202ENST00000398465 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
VPREB3-202ENST00000398465 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
VPREB3-202ENST00000398465 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
VPREB3-202ENST00000398465 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
VPREB3-202ENST00000398465 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
VPREB3-202ENST00000398465 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
VPREB3-202ENST00000398465 CHL1O00533 1208 aa16.69■□□□□ 0.26
VPREB3-202ENST00000398465 TM4SF1P30408 202 aa16.69■□□□□ 0.26
VPREB3-202ENST00000398465 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
VPREB3-202ENST00000398465 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
VPREB3-202ENST00000398465 NFIXQ14938 502 aa16.68■□□□□ 0.26
VPREB3-202ENST00000398465 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
VPREB3-202ENST00000398465 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
VPREB3-202ENST00000398465 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
VPREB3-202ENST00000398465 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
VPREB3-202ENST00000398465 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
VPREB3-202ENST00000398465 CAMTA2O94983 1202 aa16.67■□□□□ 0.26
VPREB3-202ENST00000398465 TGFB2P61812 414 aa16.67■□□□□ 0.26
VPREB3-202ENST00000398465 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
VPREB3-202ENST00000398465 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
VPREB3-202ENST00000398465 HOXB7P09629 217 aa16.66■□□□□ 0.26
VPREB3-202ENST00000398465 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
VPREB3-202ENST00000398465 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
VPREB3-202ENST00000398465 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
VPREB3-202ENST00000398465 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
VPREB3-202ENST00000398465 GPR162Q16538 588 aa16.65■□□□□ 0.26
VPREB3-202ENST00000398465 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
VPREB3-202ENST00000398465 GNAI1P63096 354 aa16.64■□□□□ 0.25
VPREB3-202ENST00000398465 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
VPREB3-202ENST00000398465 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
VPREB3-202ENST00000398465 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
VPREB3-202ENST00000398465 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
VPREB3-202ENST00000398465 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
VPREB3-202ENST00000398465 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
VPREB3-202ENST00000398465 SERPINB2P05120 415 aa16.62■□□□□ 0.25
VPREB3-202ENST00000398465 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPREB3-202ENST00000398465 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
VPREB3-202ENST00000398465 IL16Q14005 1332 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms