RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
PPME1-202ENST00000398427 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
PPME1-202ENST00000398427 PLSCR1O15162 318 aa14.7□□□□□ -0.06
PPME1-202ENST00000398427 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
PPME1-202ENST00000398427 ITPK1Q13572 414 aa14.7□□□□□ -0.06
PPME1-202ENST00000398427 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
PPME1-202ENST00000398427 CT47B1P0C2W7 299 aaPredicted RBP14.69□□□□□ -0.06
PPME1-202ENST00000398427 NECTIN2Q92692 538 aa14.69□□□□□ -0.06
PPME1-202ENST00000398427 CCNL1Q9UK58 526 aaPredicted RBP14.69□□□□□ -0.06
PPME1-202ENST00000398427 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
PPME1-202ENST00000398427 HDGFL1Q5TGJ6 251 aa14.68□□□□□ -0.06
PPME1-202ENST00000398427 PROM2Q8N271 834 aa14.68□□□□□ -0.06
PPME1-202ENST00000398427 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
PPME1-202ENST00000398427 TXNRD1Q16881 649 aa14.68□□□□□ -0.06
PPME1-202ENST00000398427 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
PPME1-202ENST00000398427 MYH14Q7Z406 1995 aaKnown RBP14.67□□□□□ -0.06
PPME1-202ENST00000398427 TCERG1O14776 1098 aaKnown RBP14.67□□□□□ -0.06
PPME1-202ENST00000398427 EN1Q05925 392 aaPredicted RBP14.67□□□□□ -0.06
PPME1-202ENST00000398427 SF3B2Q13435 895 aaKnown RBP14.67□□□□□ -0.06
PPME1-202ENST00000398427 LINC00116Q8NCU8 138 aa14.67□□□□□ -0.06
PPME1-202ENST00000398427 RREB1Q92766 1687 aa14.67□□□□□ -0.06
PPME1-202ENST00000398427 CYP19A1P11511 503 aaPredicted RBP14.66□□□□□ -0.06
PPME1-202ENST00000398427 NBR1Q14596 966 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 DEFB132Q7Z7B7 95 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
PPME1-202ENST00000398427 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
PPME1-202ENST00000398427 SLC27A3Q5K4L6 730 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 CCDC125Q86Z20 511 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.064e-10■■■■□ 23.2
PPME1-202ENST00000398427 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 CAMKK2Q96RR4 588 aa14.66□□□□□ -0.06
PPME1-202ENST00000398427 C4BP0C0L5 1744 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 BAG6P46379 1132 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 SSH1Q8WYL5 1049 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 BCL2L13Q9BXK5 485 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 STARD3NLO95772 234 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 A1BGP04217 495 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
PPME1-202ENST00000398427 EZH2Q15910 746 aaKnown RBP14.65□□□□□ -0.06
PPME1-202ENST00000398427 CCDC30Q5VVM6 783 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 CHPF2Q9P2E5 772 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
PPME1-202ENST00000398427 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
PPME1-202ENST00000398427 ANXA1P04083 346 aa14.64□□□□□ -0.07
PPME1-202ENST00000398427 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
PPME1-202ENST00000398427 PDIA6Q15084 440 aa14.64□□□□□ -0.07
PPME1-202ENST00000398427 PROSER3Q2NL68 480 aa14.64□□□□□ -0.07
PPME1-202ENST00000398427 NUP188Q5SRE5 1749 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 NBPF14Q5TI25 921 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
PPME1-202ENST00000398427 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 BCAR3O75815 825 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 INTS5Q6P9B9 1019 aaKnown RBP14.63□□□□□ -0.07
PPME1-202ENST00000398427 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
PPME1-202ENST00000398427 STK31Q9BXU1 1019 aa14.62□□□□□ -0.07
PPME1-202ENST00000398427 CCDC87Q9NVE4 849 aa14.62□□□□□ -0.07
PPME1-202ENST00000398427 DBF4Q9UBU7 674 aaPredicted RBP14.62□□□□□ -0.07
PPME1-202ENST00000398427 NOP58Q9Y2X3 529 aaKnown RBP14.62□□□□□ -0.07
PPME1-202ENST00000398427 ERBB4Q15303 1308 aa14.62□□□□□ -0.07
PPME1-202ENST00000398427 CNTNAP4Q9C0A0 1308 aa14.62□□□□□ -0.07
PPME1-202ENST00000398427 LRP10Q7Z4F1 713 aa14.61□□□□□ -0.07
PPME1-202ENST00000398427 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
PPME1-202ENST00000398427 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
PPME1-202ENST00000398427 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
PPME1-202ENST00000398427 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
PPME1-202ENST00000398427 MYL6BP14649 208 aa14.61□□□□□ -0.07
PPME1-202ENST00000398427 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
PPME1-202ENST00000398427 UBR3Q6ZT12 1888 aa14.6□□□□□ -0.07
PPME1-202ENST00000398427 G2E3Q7L622 706 aa14.6□□□□□ -0.07
PPME1-202ENST00000398427 RC3H1Q5TC82 1133 aaKnown RBP14.59□□□□□ -0.07
PPME1-202ENST00000398427 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
PPME1-202ENST00000398427 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
PPME1-202ENST00000398427 BRPF1P55201 1214 aaPredicted RBP14.59□□□□□ -0.07
PPME1-202ENST00000398427 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
PPME1-202ENST00000398427 HYPKQ9NX55 129 aa14.58□□□□□ -0.07
PPME1-202ENST00000398427 GNPATO15228 680 aa14.58□□□□□ -0.08
PPME1-202ENST00000398427 IL6STP40189 918 aaPredicted RBP14.58□□□□□ -0.08
PPME1-202ENST00000398427 ZNF827Q17R98 1081 aa14.58□□□□□ -0.08
PPME1-202ENST00000398427 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
PPME1-202ENST00000398427 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
PPME1-202ENST00000398427 SMIM5Q71RC9 77 aa14.57□□□□□ -0.08
PPME1-202ENST00000398427 AK7Q96M32 723 aa14.57□□□□□ -0.08
PPME1-202ENST00000398427 FLIIQ13045 1269 aa14.57□□□□□ -0.08
PPME1-202ENST00000398427 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
PPME1-202ENST00000398427 C4AP0C0L4 1744 aa14.57□□□□□ -0.08
PPME1-202ENST00000398427 COL15A1P39059 1388 aa14.56□□□□□ -0.08
PPME1-202ENST00000398427 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
PPME1-202ENST00000398427 RPS6KA4O75676 772 aa14.56□□□□□ -0.08
PPME1-202ENST00000398427 XAGE3Q8WTP9 111 aa14.56□□□□□ -0.08
PPME1-202ENST00000398427 AIMP1Q12904 312 aaKnown RBP14.56□□□□□ -0.08
PPME1-202ENST00000398427 COPS6Q7L5N1 327 aa14.56□□□□□ -0.08
PPME1-202ENST00000398427 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
PPME1-202ENST00000398427 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
PPME1-202ENST00000398427 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
PPME1-202ENST00000398427 HMGB2P26583 209 aaKnown RBP14.55□□□□□ -0.08
PPME1-202ENST00000398427 RTCBQ9Y3I0 505 aaKnown RBP14.55□□□□□ -0.08
PPME1-202ENST00000398427 ARFGEF2Q9Y6D5 1785 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms