RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 FCHSD2O94868 740 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 SPDYE2Q495Y8 402 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 AK7Q96M32 723 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 TNRC6CQ9HCJ0 1690 aaKnown RBP8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 KIF24Q5T7B8 1368 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
SMARCE1P6-201ENST00000398372 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 TNNT2P45379 298 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 TGFB2P61812 414 aa8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 LINC00116Q8NCU8 138 aa8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 RNF181Q9P0P0 153 aa8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 SUPT16HQ9Y5B9 1047 aaKnown RBP8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
SMARCE1P6-201ENST00000398372 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 POLKQ9UBT6 870 aa8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 ITGB4P16144 1822 aa8.56□□□□□ -1.04
SMARCE1P6-201ENST00000398372 POTECB2RU33 542 aa8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 ITPK1Q13572 414 aa8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1P6-201ENST00000398372 FANCIQ9NVI1 1328 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 SSFA2P28290 1259 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 GSE1Q14687 1217 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 LHX8Q68G74 356 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PKNOX2Q96KN3 472 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 EYA1Q99502 592 aa8.54□□□□□ -1.04
SMARCE1P6-201ENST00000398372 GNPATO15228 680 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 LBX1P52954 281 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 RASSF7Q02833 373 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 MORC1Q86VD1 984 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 PIGBQ92521 554 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 KNSTRNQ9Y448 316 aa8.53□□□□□ -1.04
SMARCE1P6-201ENST00000398372 CYP27B1O15528 508 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 NEFLP07196 543 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CHRNA5P30532 468 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 EIF4A2Q14240 407 aaKnown RBP8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 ZBED9Q6R2W3 1325 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
SMARCE1P6-201ENST00000398372 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 LOC102724428A0A0B4J2F2 783 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 RGS19P49795 217 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 SIK1P57059 783 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 MLLT1Q03111 559 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 SPG7Q9UQ90 795 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CCDC88AQ3V6T2 1871 aa8.51□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CCDC85CA6NKD9 419 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 POTEIP0CG38 1075 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 GYS1P13807 737 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 VEGFBP49765 207 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 RALBP1Q15311 655 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 VIRMAQ69YN4 1812 aaKnown RBP8.5□□□□□ -1.05
SMARCE1P6-201ENST00000398372 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 HSPA8P11142 646 aaKnown RBP8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 NLGN1Q8N2Q7 840 aa8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 WBP1LQ9NX94 342 aa8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PODXL2Q9NZ53 605 aa8.49□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CNTNAP1P78357 1384 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 TULP1O00294 542 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 HNRNPUQ00839 825 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 DDR1Q08345 913 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CC2D1BQ5T0F9 858 aaKnown RBP8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 IFNL2Q8IZJ0 200 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
SMARCE1P6-201ENST00000398372 TIAM2Q8IVF5 1701 aa8.47□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PHKG2P15735 406 aa8.47□□□□□ -1.05
SMARCE1P6-201ENST00000398372 CNGB1Q14028 1251 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1P6-201ENST00000398372 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
SMARCE1P6-201ENST00000398372 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms