RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PIGBQ92521 554 aa13.53□□□□□ -0.24
NIFKP1-201ENST00000398317 NCAPD2Q15021 1401 aa13.53□□□□□ -0.24
NIFKP1-201ENST00000398317 G3V3G9 751 aa13.52□□□□□ -0.25
NIFKP1-201ENST00000398317 PPP1R37O75864 691 aa13.52□□□□□ -0.25
NIFKP1-201ENST00000398317 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
NIFKP1-201ENST00000398317 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
NIFKP1-201ENST00000398317 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 EIF4A2Q14240 407 aaKnown RBP13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
NIFKP1-201ENST00000398317 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
NIFKP1-201ENST00000398317 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
NIFKP1-201ENST00000398317 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
NIFKP1-201ENST00000398317 PANK3Q9H999 370 aa13.5□□□□□ -0.25
NIFKP1-201ENST00000398317 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
NIFKP1-201ENST00000398317 PHF14O94880 888 aa13.49□□□□□ -0.25
NIFKP1-201ENST00000398317 AK7Q96M32 723 aa13.49□□□□□ -0.25
NIFKP1-201ENST00000398317 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 PHKG2P15735 406 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 SIK1P57059 783 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
NIFKP1-201ENST00000398317 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
NIFKP1-201ENST00000398317 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
NIFKP1-201ENST00000398317 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
NIFKP1-201ENST00000398317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
NIFKP1-201ENST00000398317 ITPK1Q13572 414 aa13.45□□□□□ -0.26
NIFKP1-201ENST00000398317 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
NIFKP1-201ENST00000398317 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
NIFKP1-201ENST00000398317 ATP6V1AP38606 617 aa13.44□□□□□ -0.26
NIFKP1-201ENST00000398317 GNPATO15228 680 aa13.43□□□□□ -0.26
NIFKP1-201ENST00000398317 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
NIFKP1-201ENST00000398317 TMEM121BQ9BXQ6 578 aaPredicted RBP13.43□□□□□ -0.26
NIFKP1-201ENST00000398317 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
NIFKP1-201ENST00000398317 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
NIFKP1-201ENST00000398317 SSFA2P28290 1259 aa13.42□□□□□ -0.26
NIFKP1-201ENST00000398317 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
NIFKP1-201ENST00000398317 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
NIFKP1-201ENST00000398317 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
NIFKP1-201ENST00000398317 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
NIFKP1-201ENST00000398317 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
NIFKP1-201ENST00000398317 ZNF530Q6P9A1 599 aaPredicted RBP13.41□□□□□ -0.26
NIFKP1-201ENST00000398317 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
NIFKP1-201ENST00000398317 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
NIFKP1-201ENST00000398317 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
NIFKP1-201ENST00000398317 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
NIFKP1-201ENST00000398317 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
NIFKP1-201ENST00000398317 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
NIFKP1-201ENST00000398317 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
NIFKP1-201ENST00000398317 CABP4P57796 275 aa13.39□□□□□ -0.27
NIFKP1-201ENST00000398317 KDRP35968 1356 aa13.39□□□□□ -0.27
NIFKP1-201ENST00000398317 MYH14Q7Z406 1995 aaKnown RBP13.39□□□□□ -0.27
NIFKP1-201ENST00000398317 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 MTHFSP49914 203 aa13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 SULT6B1Q6IMI4 303 aa13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
NIFKP1-201ENST00000398317 COL5A3P25940 1745 aaPredicted RBP13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 MMP10P09238 476 aa13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 IL13P35225 146 aa13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
NIFKP1-201ENST00000398317 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
NIFKP1-201ENST00000398317 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
NIFKP1-201ENST00000398317 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 VIRMAQ69YN4 1812 aaKnown RBP13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
NIFKP1-201ENST00000398317 ATP10DQ9P241 1426 aa13.34□□□□□ -0.27
NIFKP1-201ENST00000398317 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
NIFKP1-201ENST00000398317 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
NIFKP1-201ENST00000398317 C4AP0C0L4 1744 aa13.33□□□□□ -0.27
NIFKP1-201ENST00000398317 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
NIFKP1-201ENST00000398317 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
NIFKP1-201ENST00000398317 RFC4P35249 363 aa13.33□□□□□ -0.28
NIFKP1-201ENST00000398317 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
NIFKP1-201ENST00000398317 HMOX1P09601 288 aa13.32□□□□□ -0.28
NIFKP1-201ENST00000398317 GYS1P13807 737 aa13.32□□□□□ -0.28
NIFKP1-201ENST00000398317 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
NIFKP1-201ENST00000398317 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
NIFKP1-201ENST00000398317 TJP1Q07157 1748 aa13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 A0A0G2JLW4 131 aa13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
NIFKP1-201ENST00000398317 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms