RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 RFC4P35249 363 aa22.07■■□□□ 1.12
APTR-201ENST00000398043 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
APTR-201ENST00000398043 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
APTR-201ENST00000398043 TEX13AQ9BXU3 409 aaPredicted RBP22.07■■□□□ 1.12
APTR-201ENST00000398043 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
APTR-201ENST00000398043 RIPK4P57078 832 aa22.06■■□□□ 1.12
APTR-201ENST00000398043 AFDNP55196 1824 aaKnown RBP22.06■■□□□ 1.12
APTR-201ENST00000398043 STARD3NLO95772 234 aa22.05■■□□□ 1.12
APTR-201ENST00000398043 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
APTR-201ENST00000398043 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
APTR-201ENST00000398043 SRP68Q9UHB9 627 aaKnown RBP22.05■■□□□ 1.12
APTR-201ENST00000398043 CHD4Q14839 1912 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 COL15A1P39059 1388 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 EIF5P55010 431 aaKnown RBP22.04■■□□□ 1.12
APTR-201ENST00000398043 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 SCN7AQ01118 1682 aa22.04■■□□□ 1.12
APTR-201ENST00000398043 MMP10P09238 476 aa22.03■■□□□ 1.12
APTR-201ENST00000398043 NLGN2Q8NFZ4 835 aa22.03■■□□□ 1.12
APTR-201ENST00000398043 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
APTR-201ENST00000398043 TRIM35Q9UPQ4 493 aa22.03■■□□□ 1.12
APTR-201ENST00000398043 SNRPA1P09661 255 aaKnown RBP22.02■■□□□ 1.12
APTR-201ENST00000398043 RRP7AQ9Y3A4 280 aaKnown RBP22.02■■□□□ 1.12
APTR-201ENST00000398043 CD2APQ9Y5K6 639 aa22.02■■□□□ 1.12
APTR-201ENST00000398043 NRXN2Q9P2S2 1712 aa22.02■■□□□ 1.12
APTR-201ENST00000398043 A1BGP04217 495 aa22.01■■□□□ 1.11
APTR-201ENST00000398043 CANXP27824 592 aaKnown RBP22.01■■□□□ 1.11
APTR-201ENST00000398043 NARFQ9UHQ1 456 aa22.01■■□□□ 1.11
APTR-201ENST00000398043 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
APTR-201ENST00000398043 N4BP2Q86UW6 1770 aaPredicted RBP22■■□□□ 1.11
APTR-201ENST00000398043 FKBP8Q14318 412 aa22■■□□□ 1.11
APTR-201ENST00000398043 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
APTR-201ENST00000398043 ANP32CO43423 234 aa21.99■■□□□ 1.11
APTR-201ENST00000398043 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
APTR-201ENST00000398043 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
APTR-201ENST00000398043 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
APTR-201ENST00000398043 USPL1Q5W0Q7 1092 aa21.99■■□□□ 1.11
APTR-201ENST00000398043 KLHL34Q8N239 644 aa21.99■■□□□ 1.11
APTR-201ENST00000398043 TM4SF1P30408 202 aa21.98■■□□□ 1.11
APTR-201ENST00000398043 GIGYF1O75420 1035 aaPredicted RBP21.97■■□□□ 1.11
APTR-201ENST00000398043 NEUROD2Q15784 382 aa21.97■■□□□ 1.11
APTR-201ENST00000398043 BABAM1Q9NWV8 329 aa21.97■■□□□ 1.11
APTR-201ENST00000398043 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
APTR-201ENST00000398043 ZPR1O75312 459 aa21.96■■□□□ 1.11
APTR-201ENST00000398043 DDR1Q08345 913 aa21.96■■□□□ 1.11
APTR-201ENST00000398043 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
APTR-201ENST00000398043 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
APTR-201ENST00000398043 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
APTR-201ENST00000398043 GOLGB1Q14789 3259 aaKnown RBP21.95■■□□□ 1.1
APTR-201ENST00000398043 A0A087WZG4 1122 aa21.94■■□□□ 1.1
APTR-201ENST00000398043 APAF1O14727 1248 aa21.94■■□□□ 1.1
APTR-201ENST00000398043 NUP98P52948 1817 aa21.94■■□□□ 1.1
APTR-201ENST00000398043 POLRMTO00411 1230 aaKnown RBP21.93■■□□□ 1.1
APTR-201ENST00000398043 CHL1O00533 1208 aa21.93■■□□□ 1.1
APTR-201ENST00000398043 PIP4K2AP48426 406 aaPredicted RBP21.93■■□□□ 1.1
APTR-201ENST00000398043 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
APTR-201ENST00000398043 PXDNLA1KZ92 1463 aa21.92■■□□□ 1.1
APTR-201ENST00000398043 NFIXQ14938 502 aa21.92■■□□□ 1.1
APTR-201ENST00000398043 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
APTR-201ENST00000398043 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
APTR-201ENST00000398043 UTRNP46939 3433 aa21.92■■□□□ 1.1
APTR-201ENST00000398043 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
APTR-201ENST00000398043 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
APTR-201ENST00000398043 ANKRD31Q8N7Z5 1873 aa21.91■■□□□ 1.1
APTR-201ENST00000398043 DCAF8L1A6NGE4 600 aa21.9■■□□□ 1.1
APTR-201ENST00000398043 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
APTR-201ENST00000398043 DLEC1Q9Y238 1755 aa21.89■■□□□ 1.1
APTR-201ENST00000398043 ARFGEF1Q9Y6D6 1849 aa21.89■■□□□ 1.09
APTR-201ENST00000398043 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
APTR-201ENST00000398043 DZIP3Q86Y13 1208 aaKnown RBP21.88■■□□□ 1.09
APTR-201ENST00000398043 ZNF330Q9Y3S2 320 aaPredicted RBP21.88■■□□□ 1.09
APTR-201ENST00000398043 TGFB2P61812 414 aa21.87■■□□□ 1.09
APTR-201ENST00000398043 TBC1D9BQ66K14 1250 aa21.87■■□□□ 1.09
APTR-201ENST00000398043 GPR162Q16538 588 aa21.86■■□□□ 1.09
APTR-201ENST00000398043 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
APTR-201ENST00000398043 RGL2O15211 777 aa21.85■■□□□ 1.09
APTR-201ENST00000398043 LRP10Q7Z4F1 713 aa21.85■■□□□ 1.09
APTR-201ENST00000398043 ERBB4Q15303 1308 aa21.84■■□□□ 1.09
APTR-201ENST00000398043 SERPINB2P05120 415 aa21.84■■□□□ 1.09
APTR-201ENST00000398043 KCNA3P22001 575 aa21.84■■□□□ 1.09
APTR-201ENST00000398043 PDIA6Q15084 440 aa21.84■■□□□ 1.09
APTR-201ENST00000398043 KRT24Q2M2I5 525 aa21.84■■□□□ 1.09
APTR-201ENST00000398043 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
APTR-201ENST00000398043 CLEC4GQ6UXB4 293 aa21.83■■□□□ 1.09
APTR-201ENST00000398043 A0A0G2JLW4 131 aa21.82■■□□□ 1.08
APTR-201ENST00000398043 DPEP1P16444 411 aa21.82■■□□□ 1.08
APTR-201ENST00000398043 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
APTR-201ENST00000398043 MBIPQ9NS73 344 aa21.82■■□□□ 1.08
APTR-201ENST00000398043 LAS1LQ9Y4W2 734 aaKnown RBP21.82■■□□□ 1.08
APTR-201ENST00000398043 BICDL1Q6ZP65 573 aa21.81■■□□□ 1.08
APTR-201ENST00000398043 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
APTR-201ENST00000398043 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
APTR-201ENST00000398043 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
APTR-201ENST00000398043 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
APTR-201ENST00000398043 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
APTR-201ENST00000398043 ANKRD36CQ5JPF3 1778 aa21.8■■□□□ 1.08
APTR-201ENST00000398043 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
APTR-201ENST00000398043 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
APTR-201ENST00000398043 HOXB7P09629 217 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms