RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 LRRC4BQ9NT99 713 aa30.41■■■□□ 2.46
TSPAN4-203ENST00000397397 TAF1LQ8IZX4 1826 aa30.4■■■□□ 2.46
TSPAN4-203ENST00000397397 STARD3NLO95772 234 aa30.4■■■□□ 2.46
TSPAN4-203ENST00000397397 HDGFL1Q5TGJ6 251 aa30.4■■■□□ 2.46
TSPAN4-203ENST00000397397 NECTIN2Q92692 538 aa30.4■■■□□ 2.46
TSPAN4-203ENST00000397397 COL5A3P25940 1745 aaPredicted RBP30.39■■■□□ 2.46
TSPAN4-203ENST00000397397 CT47B1P0C2W7 299 aaPredicted RBP30.39■■■□□ 2.46
TSPAN4-203ENST00000397397 CYP19A1P11511 503 aaPredicted RBP30.39■■■□□ 2.45
TSPAN4-203ENST00000397397 LINC00116Q8NCU8 138 aa30.39■■■□□ 2.45
TSPAN4-203ENST00000397397 CHMP4AQ9BY43 222 aa30.37■■■□□ 2.45
TSPAN4-203ENST00000397397 R3HDM1Q15032 1099 aaKnown RBP30.36■■■□□ 2.45
TSPAN4-203ENST00000397397 CCDC30Q5VVM6 783 aa30.36■■■□□ 2.45
TSPAN4-203ENST00000397397 TCERG1O14776 1098 aaKnown RBP30.34■■■□□ 2.45
TSPAN4-203ENST00000397397 HMGB2P26583 209 aaKnown RBP30.34■■■□□ 2.45
TSPAN4-203ENST00000397397 A1BGP04217 495 aa30.33■■■□□ 2.45
TSPAN4-203ENST00000397397 CRKLP46109 303 aaKnown RBP30.33■■■□□ 2.45
TSPAN4-203ENST00000397397 ZNF428Q96B54 188 aa30.33■■■□□ 2.45
TSPAN4-203ENST00000397397 C4BP0C0L5 1744 aa30.33■■■□□ 2.45
TSPAN4-203ENST00000397397 CCDC87Q9NVE4 849 aa30.32■■■□□ 2.44
TSPAN4-203ENST00000397397 CNTNAP4Q9C0A0 1308 aa30.31■■■□□ 2.44
TSPAN4-203ENST00000397397 STK31Q9BXU1 1019 aa30.31■■■□□ 2.44
TSPAN4-203ENST00000397397 CHPF2Q9P2E5 772 aa30.31■■■□□ 2.44
TSPAN4-203ENST00000397397 MYH14Q7Z406 1995 aaKnown RBP30.31■■■□□ 2.44
TSPAN4-203ENST00000397397 ERBB4Q15303 1308 aa30.31■■■□□ 2.44
TSPAN4-203ENST00000397397 INTS5Q6P9B9 1019 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-203ENST00000397397 PIP4K2AP48426 406 aaPredicted RBP30.3■■■□□ 2.44
TSPAN4-203ENST00000397397 RC3H1Q5TC82 1133 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-203ENST00000397397 ZBTB1Q9Y2K1 713 aa30.3■■■□□ 2.44
TSPAN4-203ENST00000397397 CANXP27824 592 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-203ENST00000397397 RARSP54136 660 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-203ENST00000397397 SSH1Q8WYL5 1049 aa30.29■■■□□ 2.44
TSPAN4-203ENST00000397397 DBF4Q9UBU7 674 aaPredicted RBP30.29■■■□□ 2.44
TSPAN4-203ENST00000397397 NBPF26B4DH59 902 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 MYL6BP14649 208 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 ALDH1L2Q3SY69 923 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 NBPF14Q5TI25 921 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 NBPF10Q6P3W6 841 aaKnown RBP30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 NBPF15Q8N660 670 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 AK7Q96M32 723 aa30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 DDX21Q9NR30 783 aaKnown RBP eCLIP30.28■■■□□ 2.44
TSPAN4-203ENST00000397397 ANXA1P04083 346 aa30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 PDIA6Q15084 440 aa30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 PROSER3Q2NL68 480 aa30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 BCL2L13Q9BXK5 485 aa30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 RCAN3Q9UKA8 241 aa30.27■■■□□ 2.44
TSPAN4-203ENST00000397397 SLC4A2P04920 1241 aa30.26■■■□□ 2.43
TSPAN4-203ENST00000397397 SMC4Q9NTJ3 1288 aa30.26■■■□□ 2.43
TSPAN4-203ENST00000397397 CACNA1FO60840 1977 aa30.25■■■□□ 2.43
TSPAN4-203ENST00000397397 GNPATO15228 680 aa30.24■■■□□ 2.43
TSPAN4-203ENST00000397397 MRPL50Q8N5N7 158 aaKnown RBP30.23■■■□□ 2.43
TSPAN4-203ENST00000397397 HYPKQ9NX55 129 aa30.23■■■□□ 2.43
TSPAN4-203ENST00000397397 ZNF330Q9Y3S2 320 aaPredicted RBP30.23■■■□□ 2.43
TSPAN4-203ENST00000397397 IL6STP40189 918 aaPredicted RBP30.22■■■□□ 2.43
TSPAN4-203ENST00000397397 RPS6KA4O75676 772 aa30.22■■■□□ 2.43
TSPAN4-203ENST00000397397 CENPBP07199 599 aaPredicted RBP30.22■■■□□ 2.43
TSPAN4-203ENST00000397397 ZNF827Q17R98 1081 aa30.22■■■□□ 2.43
TSPAN4-203ENST00000397397 AKT1S1Q96B36 256 aa30.22■■■□□ 2.43
TSPAN4-203ENST00000397397 BCAR3O75815 825 aa30.21■■■□□ 2.43
TSPAN4-203ENST00000397397 RTCBQ9Y3I0 505 aaKnown RBP30.21■■■□□ 2.43
TSPAN4-203ENST00000397397 LRP10Q7Z4F1 713 aa30.2■■■□□ 2.42
TSPAN4-203ENST00000397397 NPM2Q86SE8 214 aaKnown RBP30.2■■■□□ 2.42
TSPAN4-203ENST00000397397 STK32BQ9NY57 414 aa30.2■■■□□ 2.42
TSPAN4-203ENST00000397397 UBR3Q6ZT12 1888 aa30.2■■■□□ 2.42
TSPAN4-203ENST00000397397 EIF5P55010 431 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-203ENST00000397397 G2E3Q7L622 706 aa30.19■■■□□ 2.42
TSPAN4-203ENST00000397397 PHAXQ9H814 394 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-203ENST00000397397 TFCP2L1Q9NZI6 479 aa30.18■■■□□ 2.42
TSPAN4-203ENST00000397397 AIMP1Q12904 312 aaKnown RBP30.17■■■□□ 2.42
TSPAN4-203ENST00000397397 SMIM5Q71RC9 77 aa30.17■■■□□ 2.42
TSPAN4-203ENST00000397397 XAGE3Q8WTP9 111 aa30.17■■■□□ 2.42
TSPAN4-203ENST00000397397 COL15A1P39059 1388 aa30.17■■■□□ 2.42
TSPAN4-203ENST00000397397 PHF14O94880 888 aa30.16■■■□□ 2.42
TSPAN4-203ENST00000397397 SLC15A2Q16348 729 aa30.16■■■□□ 2.42
TSPAN4-203ENST00000397397 COPS6Q7L5N1 327 aa30.16■■■□□ 2.42
TSPAN4-203ENST00000397397 TUBGCP6Q96RT7 1819 aa30.16■■■□□ 2.42
TSPAN4-203ENST00000397397 SRCAPQ6ZRS2 3230 aa30.16■■■□□ 2.42
TSPAN4-203ENST00000397397 BRPF1P55201 1214 aaPredicted RBP30.15■■■□□ 2.42
TSPAN4-203ENST00000397397 AMIGO3Q86WK7 504 aa30.15■■■□□ 2.42
TSPAN4-203ENST00000397397 ARXQ96QS3 562 aa30.15■■■□□ 2.42
TSPAN4-203ENST00000397397 LRP5O75197 1615 aa30.14■■■□□ 2.42
TSPAN4-203ENST00000397397 FLIIQ13045 1269 aa30.14■■■□□ 2.42
TSPAN4-203ENST00000397397 A0A087WZG4 1122 aa30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 SSFA2P28290 1259 aa30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 TRAPPC3LQ5T215 181 aa30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 TTLL7Q6ZT98 887 aa30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 NOB1Q9ULX3 412 aaKnown RBP30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 KIF16BQ96L93 1317 aa30.13■■■□□ 2.41
TSPAN4-203ENST00000397397 ADRA2BP18089 450 aa30.12■■■□□ 2.41
TSPAN4-203ENST00000397397 DZIP3Q86Y13 1208 aaKnown RBP30.12■■■□□ 2.41
TSPAN4-203ENST00000397397 FRAT1Q92837 279 aaPredicted RBP30.12■■■□□ 2.41
TSPAN4-203ENST00000397397 PDGFDQ9GZP0 370 aaPredicted RBP30.12■■■□□ 2.41
TSPAN4-203ENST00000397397 FKBP5Q13451 457 aaPredicted RBP30.11■■■□□ 2.41
TSPAN4-203ENST00000397397 KIF6Q6ZMV9 814 aa30.11■■■□□ 2.41
TSPAN4-203ENST00000397397 ARHGEF1Q92888 912 aaKnown RBP30.11■■■□□ 2.41
TSPAN4-203ENST00000397397 TBC1D2BQ9UPU7 963 aa30.11■■■□□ 2.41
TSPAN4-203ENST00000397397 CASZ1Q86V15 1759 aa30.09■■■□□ 2.41
TSPAN4-203ENST00000397397 C4AP0C0L4 1744 aa30.09■■■□□ 2.41
TSPAN4-203ENST00000397397 QSER1Q2KHR3 1735 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms