RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 TJP1Q07157 1748 aa27.33■■□□□ 1.96
SEC13-207ENST00000397105 CHL1O00533 1208 aa27.32■■□□□ 1.96
SEC13-207ENST00000397105 RFC4P35249 363 aa27.32■■□□□ 1.96
SEC13-207ENST00000397105 NCBP3Q53F19 620 aaKnown RBP27.32■■□□□ 1.96
SEC13-207ENST00000397105 COL5A3P25940 1745 aaPredicted RBP27.32■■□□□ 1.96
SEC13-207ENST00000397105 PTGER2P43116 358 aa27.31■■□□□ 1.96
SEC13-207ENST00000397105 CCDC27Q2M243 656 aa27.31■■□□□ 1.96
SEC13-207ENST00000397105 CANXP27824 592 aaKnown RBP27.3■■□□□ 1.96
SEC13-207ENST00000397105 CFAP44Q96MT7 982 aa27.3■■□□□ 1.96
SEC13-207ENST00000397105 PPP1R1BQ9UD71 204 aaPredicted RBP27.3■■□□□ 1.96
SEC13-207ENST00000397105 ZBTB1Q9Y2K1 713 aa27.3■■□□□ 1.96
SEC13-207ENST00000397105 USP16Q9Y5T5 823 aa27.3■■□□□ 1.96
SEC13-207ENST00000397105 PRAMEF22A3QJZ6 481 aa27.29■■□□□ 1.96
SEC13-207ENST00000397105 GIGYF1O75420 1035 aaPredicted RBP27.29■■□□□ 1.96
SEC13-207ENST00000397105 POLD1P28340 1107 aa27.29■■□□□ 1.96
SEC13-207ENST00000397105 LRP5O75197 1615 aa27.29■■□□□ 1.96
SEC13-207ENST00000397105 TUBGCP6Q96RT7 1819 aa27.29■■□□□ 1.96
SEC13-207ENST00000397105 UBR3Q6ZT12 1888 aa27.28■■□□□ 1.96
SEC13-207ENST00000397105 SOS1Q07889 1333 aaPredicted RBP27.28■■□□□ 1.96
SEC13-207ENST00000397105 SENP3-EIF4A1A0A087X0R7 540 aa27.28■■□□□ 1.96
SEC13-207ENST00000397105 MIER1Q8N108 512 aa27.28■■□□□ 1.96
SEC13-207ENST00000397105 SGIP1Q9BQI5 828 aa27.28■■□□□ 1.96
SEC13-207ENST00000397105 A1BGP04217 495 aa27.27■■□□□ 1.96
SEC13-207ENST00000397105 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
SEC13-207ENST00000397105 GNAI1P63096 354 aa27.26■■□□□ 1.95
SEC13-207ENST00000397105 WWC1Q8IX03 1113 aa27.26■■□□□ 1.95
SEC13-207ENST00000397105 IFT57Q9NWB7 429 aa27.26■■□□□ 1.95
SEC13-207ENST00000397105 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
SEC13-207ENST00000397105 IL6STP40189 918 aaPredicted RBP27.25■■□□□ 1.95
SEC13-207ENST00000397105 EIF5P55010 431 aaKnown RBP27.25■■□□□ 1.95
SEC13-207ENST00000397105 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
SEC13-207ENST00000397105 A0A087WZG4 1122 aa27.24■■□□□ 1.95
SEC13-207ENST00000397105 ZNF853P0CG23 659 aa27.24■■□□□ 1.95
SEC13-207ENST00000397105 NGEFQ8N5V2 710 aa27.24■■□□□ 1.95
SEC13-207ENST00000397105 ARXQ96QS3 562 aa27.24■■□□□ 1.95
SEC13-207ENST00000397105 ZPR1O75312 459 aa27.23■■□□□ 1.95
SEC13-207ENST00000397105 NLGN1Q8N2Q7 840 aa27.23■■□□□ 1.95
SEC13-207ENST00000397105 SALL2Q9Y467 1007 aaPredicted RBP27.23■■□□□ 1.95
SEC13-207ENST00000397105 KDM3BQ7LBC6 1761 aa27.22■■□□□ 1.95
SEC13-207ENST00000397105 MBIPQ9NS73 344 aa27.22■■□□□ 1.95
SEC13-207ENST00000397105 COL15A1P39059 1388 aa27.22■■□□□ 1.95
SEC13-207ENST00000397105 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
SEC13-207ENST00000397105 USP42Q9H9J4 1324 aaKnown RBP27.2■■□□□ 1.95
SEC13-207ENST00000397105 GYS1P13807 737 aa27.2■■□□□ 1.94
SEC13-207ENST00000397105 SRP68Q9UHB9 627 aaKnown RBP27.2■■□□□ 1.94
SEC13-207ENST00000397105 NARFQ9UHQ1 456 aa27.2■■□□□ 1.94
SEC13-207ENST00000397105 WDR63Q8IWG1 891 aa27.18■■□□□ 1.94
SEC13-207ENST00000397105 IL16Q14005 1332 aa27.17■■□□□ 1.94
SEC13-207ENST00000397105 NBPF26B4DH59 902 aa27.17■■□□□ 1.94
SEC13-207ENST00000397105 PIP4K2AP48426 406 aaPredicted RBP27.17■■□□□ 1.94
SEC13-207ENST00000397105 USPL1Q5W0Q7 1092 aa27.17■■□□□ 1.94
SEC13-207ENST00000397105 NBPF10Q6P3W6 841 aaKnown RBP27.17■■□□□ 1.94
SEC13-207ENST00000397105 NBPF15Q8N660 670 aa27.17■■□□□ 1.94
SEC13-207ENST00000397105 EIF2S2P20042 333 aaKnown RBP27.15■■□□□ 1.94
SEC13-207ENST00000397105 KRT24Q2M2I5 525 aa27.15■■□□□ 1.94
SEC13-207ENST00000397105 TBC1D2BQ9UPU7 963 aa27.15■■□□□ 1.94
SEC13-207ENST00000397105 MMP10P09238 476 aa27.14■■□□□ 1.94
SEC13-207ENST00000397105 HOXB7P09629 217 aa27.14■■□□□ 1.94
SEC13-207ENST00000397105 FKBP8Q14318 412 aa27.14■■□□□ 1.94
SEC13-207ENST00000397105 ERBB4Q15303 1308 aa27.14■■□□□ 1.93
SEC13-207ENST00000397105 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
SEC13-207ENST00000397105 DUSP27Q5VZP5 1158 aa27.12■■□□□ 1.93
SEC13-207ENST00000397105 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
SEC13-207ENST00000397105 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
SEC13-207ENST00000397105 MYL6BP14649 208 aa27.1■■□□□ 1.93
SEC13-207ENST00000397105 TSR2Q969E8 191 aaKnown RBP27.1■■□□□ 1.93
SEC13-207ENST00000397105 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
SEC13-207ENST00000397105 SYT17Q9BSW7 474 aa27.09■■□□□ 1.93
SEC13-207ENST00000397105 BCL2L12Q9HB09 334 aa27.09■■□□□ 1.93
SEC13-207ENST00000397105 PARP3Q9Y6F1 533 aa27.09■■□□□ 1.93
SEC13-207ENST00000397105 TM4SF1P30408 202 aa27.08■■□□□ 1.93
SEC13-207ENST00000397105 HDGFL1Q5TGJ6 251 aa27.08■■□□□ 1.93
SEC13-207ENST00000397105 NECTIN2Q92692 538 aa27.08■■□□□ 1.93
SEC13-207ENST00000397105 C4AP0C0L4 1744 aa27.07■■□□□ 1.92
SEC13-207ENST00000397105 CAMTA2O94983 1202 aa27.07■■□□□ 1.92
SEC13-207ENST00000397105 C8orf58Q8NAV2 365 aa27.07■■□□□ 1.92
SEC13-207ENST00000397105 CHMP4AQ9BY43 222 aa27.07■■□□□ 1.92
SEC13-207ENST00000397105 ELL2O00472 640 aaPredicted RBP27.06■■□□□ 1.92
SEC13-207ENST00000397105 PDIA6Q15084 440 aa27.06■■□□□ 1.92
SEC13-207ENST00000397105 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
SEC13-207ENST00000397105 LAMB4A4D0S4 1761 aa27.06■■□□□ 1.92
SEC13-207ENST00000397105 NFIXQ14938 502 aa27.05■■□□□ 1.92
SEC13-207ENST00000397105 MYH16Q9H6N6 1097 aa27.05■■□□□ 1.92
SEC13-207ENST00000397105 DDX21Q9NR30 783 aaKnown RBP eCLIP27.05■■□□□ 1.923e-7■■■□□ 17.1
SEC13-207ENST00000397105 ZNF652Q9Y2D9 606 aa27.05■■□□□ 1.92
SEC13-207ENST00000397105 RGL2O15211 777 aa27.04■■□□□ 1.92
SEC13-207ENST00000397105 GOLGA2Q08379 1002 aa27.04■■□□□ 1.92
SEC13-207ENST00000397105 CLEC4GQ6UXB4 293 aa27.04■■□□□ 1.92
SEC13-207ENST00000397105 KIF6Q6ZMV9 814 aa27.04■■□□□ 1.92
SEC13-207ENST00000397105 DBF4Q9UBU7 674 aaPredicted RBP27.04■■□□□ 1.92
SEC13-207ENST00000397105 ZNF521Q96K83 1311 aa27.04■■□□□ 1.92
SEC13-207ENST00000397105 DDR1Q08345 913 aa27.03■■□□□ 1.92
SEC13-207ENST00000397105 FANCIQ9NVI1 1328 aa27.03■■□□□ 1.92
SEC13-207ENST00000397105 POLRMTO00411 1230 aaKnown RBP27.02■■□□□ 1.92
SEC13-207ENST00000397105 PROSER3Q2NL68 480 aa27.02■■□□□ 1.92
SEC13-207ENST00000397105 BICDL1Q6ZP65 573 aa27.02■■□□□ 1.92
SEC13-207ENST00000397105 CHPF2Q9P2E5 772 aa27.02■■□□□ 1.92
SEC13-207ENST00000397105 ERVV-1B6SEH8 477 aa27.01■■□□□ 1.91
SEC13-207ENST00000397105 ANXA1P04083 346 aa27.01■■□□□ 1.91
SEC13-207ENST00000397105 TBC1D9BQ66K14 1250 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms