RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-206ENST00000397021 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 APAF1O14727 1248 aa12.73□□□□□ -0.37
MCF2L-206ENST00000397021 MMP10P09238 476 aa12.73□□□□□ -0.37
MCF2L-206ENST00000397021 GYS1P13807 737 aa12.73□□□□□ -0.37
MCF2L-206ENST00000397021 NLGN2Q8NFZ4 835 aa12.73□□□□□ -0.37
MCF2L-206ENST00000397021 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
MCF2L-206ENST00000397021 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-206ENST00000397021 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
MCF2L-206ENST00000397021 FKBP8Q14318 412 aa12.72□□□□□ -0.37
MCF2L-206ENST00000397021 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
MCF2L-206ENST00000397021 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-206ENST00000397021 TSPYL4Q9UJ04 414 aa12.72□□□□□ -0.37
MCF2L-206ENST00000397021 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
MCF2L-206ENST00000397021 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
MCF2L-206ENST00000397021 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
MCF2L-206ENST00000397021 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
MCF2L-206ENST00000397021 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
MCF2L-206ENST00000397021 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
MCF2L-206ENST00000397021 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
MCF2L-206ENST00000397021 COL15A1P39059 1388 aa12.7□□□□□ -0.38
MCF2L-206ENST00000397021 ZPR1O75312 459 aa12.7□□□□□ -0.38
MCF2L-206ENST00000397021 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
MCF2L-206ENST00000397021 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
MCF2L-206ENST00000397021 WWC3Q9ULE0 1092 aa12.7□□□□□ -0.38
MCF2L-206ENST00000397021 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
MCF2L-206ENST00000397021 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-206ENST00000397021 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
MCF2L-206ENST00000397021 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
MCF2L-206ENST00000397021 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
MCF2L-206ENST00000397021 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-206ENST00000397021 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
MCF2L-206ENST00000397021 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
MCF2L-206ENST00000397021 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-206ENST00000397021 DDR1Q08345 913 aa12.68□□□□□ -0.38
MCF2L-206ENST00000397021 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
MCF2L-206ENST00000397021 BICDL1Q6ZP65 573 aa12.68□□□□□ -0.38
MCF2L-206ENST00000397021 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
MCF2L-206ENST00000397021 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
MCF2L-206ENST00000397021 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
MCF2L-206ENST00000397021 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
MCF2L-206ENST00000397021 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
MCF2L-206ENST00000397021 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-206ENST00000397021 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
MCF2L-206ENST00000397021 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
MCF2L-206ENST00000397021 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
MCF2L-206ENST00000397021 A0A087WZG4 1122 aa12.66□□□□□ -0.38
MCF2L-206ENST00000397021 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
MCF2L-206ENST00000397021 NFIXQ14938 502 aa12.66□□□□□ -0.38
MCF2L-206ENST00000397021 GPR162Q16538 588 aa12.66□□□□□ -0.38
MCF2L-206ENST00000397021 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
MCF2L-206ENST00000397021 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
MCF2L-206ENST00000397021 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
MCF2L-206ENST00000397021 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
MCF2L-206ENST00000397021 CHL1O00533 1208 aa12.65□□□□□ -0.38
MCF2L-206ENST00000397021 TM4SF1P30408 202 aa12.65□□□□□ -0.38
MCF2L-206ENST00000397021 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
MCF2L-206ENST00000397021 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
MCF2L-206ENST00000397021 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-206ENST00000397021 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
MCF2L-206ENST00000397021 MYL6BP14649 208 aa12.64□□□□□ -0.39
MCF2L-206ENST00000397021 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
MCF2L-206ENST00000397021 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
MCF2L-206ENST00000397021 C4AP0C0L4 1744 aa12.63□□□□□ -0.39
MCF2L-206ENST00000397021 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
MCF2L-206ENST00000397021 ANXA1P04083 346 aa12.63□□□□□ -0.39
MCF2L-206ENST00000397021 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
MCF2L-206ENST00000397021 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
MCF2L-206ENST00000397021 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
MCF2L-206ENST00000397021 SERPINB2P05120 415 aa12.62□□□□□ -0.39
MCF2L-206ENST00000397021 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
MCF2L-206ENST00000397021 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
MCF2L-206ENST00000397021 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
MCF2L-206ENST00000397021 DPEP1P16444 411 aa12.61□□□□□ -0.39
MCF2L-206ENST00000397021 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
MCF2L-206ENST00000397021 TTLL7Q6ZT98 887 aa12.61□□□□□ -0.39
MCF2L-206ENST00000397021 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
MCF2L-206ENST00000397021 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-206ENST00000397021 ZNF853P0CG23 659 aa12.6□□□□□ -0.39
MCF2L-206ENST00000397021 CHRNA5P30532 468 aa12.6□□□□□ -0.39
MCF2L-206ENST00000397021 HLFQ16534 295 aa12.6□□□□□ -0.39
MCF2L-206ENST00000397021 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
MCF2L-206ENST00000397021 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
MCF2L-206ENST00000397021 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 TGFB2P61812 414 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 GNAI1P63096 354 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 CALD1Q05682 793 aaKnown RBP12.59□□□□□ -0.39
MCF2L-206ENST00000397021 PDIA6Q15084 440 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
MCF2L-206ENST00000397021 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
MCF2L-206ENST00000397021 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
MCF2L-206ENST00000397021 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
MCF2L-206ENST00000397021 KIF6Q6ZMV9 814 aa12.58□□□□□ -0.4
MCF2L-206ENST00000397021 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
MCF2L-206ENST00000397021 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
MCF2L-206ENST00000397021 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms