RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ANO8Q9HCE9 1232 aaPredicted RBP21.3■■□□□ 1
AP1S3-202ENST00000396653 STK32BQ9NY57 414 aa21.3■■□□□ 1
AP1S3-202ENST00000396653 SLFN5Q08AF3 891 aa21.29■■□□□ 1
AP1S3-202ENST00000396653 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
AP1S3-202ENST00000396653 SLC15A2Q16348 729 aa21.28■■□□□ 1
AP1S3-202ENST00000396653 ZNF827Q17R98 1081 aa21.28■■□□□ 1
AP1S3-202ENST00000396653 AK7Q96M32 723 aa21.28■■□□□ 1
AP1S3-202ENST00000396653 PRAMEF22A3QJZ6 481 aa21.27■■□□□ 1
AP1S3-202ENST00000396653 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
AP1S3-202ENST00000396653 USP16Q9Y5T5 823 aa21.27■■□□□ 1
AP1S3-202ENST00000396653 ERBB4Q15303 1308 aa21.27■□□□□ 0.99
AP1S3-202ENST00000396653 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
AP1S3-202ENST00000396653 CASZ1Q86V15 1759 aa21.26■□□□□ 0.99
AP1S3-202ENST00000396653 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
AP1S3-202ENST00000396653 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
AP1S3-202ENST00000396653 CACNA1FO60840 1977 aa21.26■□□□□ 0.99
AP1S3-202ENST00000396653 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
AP1S3-202ENST00000396653 INTS5Q6P9B9 1019 aaKnown RBP21.25■□□□□ 0.99
AP1S3-202ENST00000396653 GNPATO15228 680 aa21.24■□□□□ 0.99
AP1S3-202ENST00000396653 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
AP1S3-202ENST00000396653 SSFA2P28290 1259 aa21.24■□□□□ 0.99
AP1S3-202ENST00000396653 CDCA7LQ96GN5 454 aa21.24■□□□□ 0.99
AP1S3-202ENST00000396653 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
AP1S3-202ENST00000396653 ADRA2BP18089 450 aa21.23■□□□□ 0.99
AP1S3-202ENST00000396653 C8orf58Q8NAV2 365 aa21.23■□□□□ 0.99
AP1S3-202ENST00000396653 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
AP1S3-202ENST00000396653 ZBTB1Q9Y2K1 713 aa21.23■□□□□ 0.99
AP1S3-202ENST00000396653 RTCBQ9Y3I0 505 aaKnown RBP21.23■□□□□ 0.99
AP1S3-202ENST00000396653 TFCP2L1Q9NZI6 479 aa21.22■□□□□ 0.99
AP1S3-202ENST00000396653 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
AP1S3-202ENST00000396653 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
AP1S3-202ENST00000396653 TWISTNBQ3B726 338 aaPredicted RBP21.21■□□□□ 0.99
AP1S3-202ENST00000396653 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
AP1S3-202ENST00000396653 BCORQ6W2J9 1755 aa21.2■□□□□ 0.99
AP1S3-202ENST00000396653 A1BGP04217 495 aa21.2■□□□□ 0.98
AP1S3-202ENST00000396653 HDGFL1Q5TGJ6 251 aa21.2■□□□□ 0.98
AP1S3-202ENST00000396653 TSPYL6Q8N831 410 aa21.2■□□□□ 0.98
AP1S3-202ENST00000396653 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
AP1S3-202ENST00000396653 COL15A1P39059 1388 aa21.2■□□□□ 0.98
AP1S3-202ENST00000396653 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
AP1S3-202ENST00000396653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 NBPF26B4DH59 902 aa21.18■□□□□ 0.98
AP1S3-202ENST00000396653 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 EIF5P55010 431 aaKnown RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 R3HDM1Q15032 1099 aaKnown RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 NBPF10Q6P3W6 841 aaKnown RBP21.18■□□□□ 0.98
AP1S3-202ENST00000396653 NBPF15Q8N660 670 aa21.18■□□□□ 0.98
AP1S3-202ENST00000396653 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
AP1S3-202ENST00000396653 VAMP4O75379 141 aa21.17■□□□□ 0.98
AP1S3-202ENST00000396653 CT47B1P0C2W7 299 aaPredicted RBP21.17■□□□□ 0.98
AP1S3-202ENST00000396653 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
AP1S3-202ENST00000396653 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
AP1S3-202ENST00000396653 A0A087WZG4 1122 aa21.16■□□□□ 0.98
AP1S3-202ENST00000396653 PDIA6Q15084 440 aa21.16■□□□□ 0.98
AP1S3-202ENST00000396653 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
AP1S3-202ENST00000396653 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
AP1S3-202ENST00000396653 DBF4Q9UBU7 674 aaPredicted RBP21.16■□□□□ 0.98
AP1S3-202ENST00000396653 PHF14O94880 888 aa21.15■□□□□ 0.98
AP1S3-202ENST00000396653 COL23A1Q86Y22 540 aaPredicted RBP21.15■□□□□ 0.98
AP1S3-202ENST00000396653 ZNF428Q96B54 188 aa21.15■□□□□ 0.98
AP1S3-202ENST00000396653 LRP10Q7Z4F1 713 aa21.14■□□□□ 0.97
AP1S3-202ENST00000396653 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.97
AP1S3-202ENST00000396653 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
AP1S3-202ENST00000396653 CHPF2Q9P2E5 772 aa21.14■□□□□ 0.97
AP1S3-202ENST00000396653 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
AP1S3-202ENST00000396653 PIP4K2AP48426 406 aaPredicted RBP21.13■□□□□ 0.97
AP1S3-202ENST00000396653 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
AP1S3-202ENST00000396653 ARHGEF1Q92888 912 aaKnown RBP21.13■□□□□ 0.97
AP1S3-202ENST00000396653 USP42Q9H9J4 1324 aaKnown RBP21.12■□□□□ 0.97
AP1S3-202ENST00000396653 RFC4P35249 363 aa21.12■□□□□ 0.97
AP1S3-202ENST00000396653 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
AP1S3-202ENST00000396653 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
AP1S3-202ENST00000396653 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
AP1S3-202ENST00000396653 RGL2O15211 777 aa21.11■□□□□ 0.97
AP1S3-202ENST00000396653 MYL6BP14649 208 aa21.11■□□□□ 0.97
AP1S3-202ENST00000396653 PROSER3Q2NL68 480 aa21.11■□□□□ 0.97
AP1S3-202ENST00000396653 NARFQ9UHQ1 456 aa21.11■□□□□ 0.97
AP1S3-202ENST00000396653 NUP98P52948 1817 aa21.11■□□□□ 0.97
AP1S3-202ENST00000396653 SMIM5Q71RC9 77 aa21.1■□□□□ 0.97
AP1S3-202ENST00000396653 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
AP1S3-202ENST00000396653 ZNF330Q9Y3S2 320 aaPredicted RBP21.1■□□□□ 0.97
AP1S3-202ENST00000396653 ANKRD36CQ5JPF3 1778 aa21.1■□□□□ 0.97
AP1S3-202ENST00000396653 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
AP1S3-202ENST00000396653 MSH5O43196 834 aa21.08■□□□□ 0.97
AP1S3-202ENST00000396653 ZPR1O75312 459 aa21.08■□□□□ 0.97
AP1S3-202ENST00000396653 ANXA1P04083 346 aa21.08■□□□□ 0.97
AP1S3-202ENST00000396653 ALDH1L2Q3SY69 923 aa21.08■□□□□ 0.97
AP1S3-202ENST00000396653 PDGFDQ9GZP0 370 aaPredicted RBP21.08■□□□□ 0.97
AP1S3-202ENST00000396653 CAMTA2O94983 1202 aa21.07■□□□□ 0.96
AP1S3-202ENST00000396653 KIF6Q6ZMV9 814 aa21.07■□□□□ 0.96
AP1S3-202ENST00000396653 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
AP1S3-202ENST00000396653 MAP3K15Q6ZN16 1313 aa21.06■□□□□ 0.96
AP1S3-202ENST00000396653 ERVV-1B6SEH8 477 aa21.06■□□□□ 0.96
AP1S3-202ENST00000396653 GYS1P13807 737 aa21.06■□□□□ 0.96
AP1S3-202ENST00000396653 XAGE3Q8WTP9 111 aa21.06■□□□□ 0.96
AP1S3-202ENST00000396653 SRP68Q9UHB9 627 aaKnown RBP21.06■□□□□ 0.96
AP1S3-202ENST00000396653 TBC1D2BQ9UPU7 963 aa21.06■□□□□ 0.96
AP1S3-202ENST00000396653 USPL1Q5W0Q7 1092 aa21.05■□□□□ 0.96
AP1S3-202ENST00000396653 TTLL7Q6ZT98 887 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms