RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
PSMA1-201ENST00000396394 TJP1Q07157 1748 aa16.72■□□□□ 0.27
PSMA1-201ENST00000396394 GYS1P13807 737 aa16.71■□□□□ 0.27
PSMA1-201ENST00000396394 NLGN2Q8NFZ4 835 aa16.71■□□□□ 0.27
PSMA1-201ENST00000396394 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
PSMA1-201ENST00000396394 STARD3NLO95772 234 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 GPR162Q16538 588 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
PSMA1-201ENST00000396394 FMNL2Q96PY5 1086 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 MMP10P09238 476 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 MCM10Q7L590 875 aa16.7■□□□□ 0.26
PSMA1-201ENST00000396394 YY1P25490 414 aa16.69■□□□□ 0.26
PSMA1-201ENST00000396394 SOS1Q07889 1333 aaPredicted RBP16.69■□□□□ 0.26
PSMA1-201ENST00000396394 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
PSMA1-201ENST00000396394 UBR2Q8IWV8 1755 aa16.68■□□□□ 0.26
PSMA1-201ENST00000396394 SIPA1L3O60292 1781 aaPredicted RBP16.67■□□□□ 0.26
PSMA1-201ENST00000396394 ZPR1O75312 459 aa16.67■□□□□ 0.26
PSMA1-201ENST00000396394 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
PSMA1-201ENST00000396394 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
PSMA1-201ENST00000396394 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
PSMA1-201ENST00000396394 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
PSMA1-201ENST00000396394 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
PSMA1-201ENST00000396394 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
PSMA1-201ENST00000396394 PARP3Q9Y6F1 533 aa16.66■□□□□ 0.26
PSMA1-201ENST00000396394 KCNQ3O43525 872 aa16.65■□□□□ 0.26
PSMA1-201ENST00000396394 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
PSMA1-201ENST00000396394 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
PSMA1-201ENST00000396394 GOLGB1Q14789 3259 aaKnown RBP16.65■□□□□ 0.26
PSMA1-201ENST00000396394 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
PSMA1-201ENST00000396394 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
PSMA1-201ENST00000396394 COL15A1P39059 1388 aa16.64■□□□□ 0.26
PSMA1-201ENST00000396394 A0A087WZG4 1122 aa16.64■□□□□ 0.25
PSMA1-201ENST00000396394 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
PSMA1-201ENST00000396394 TGFB2P61812 414 aa16.64■□□□□ 0.25
PSMA1-201ENST00000396394 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
PSMA1-201ENST00000396394 C4AP0C0L4 1744 aa16.63■□□□□ 0.25
PSMA1-201ENST00000396394 TM4SF1P30408 202 aa16.63■□□□□ 0.25
PSMA1-201ENST00000396394 IL6STP40189 918 aaPredicted RBP16.63■□□□□ 0.25
PSMA1-201ENST00000396394 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
PSMA1-201ENST00000396394 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
PSMA1-201ENST00000396394 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
PSMA1-201ENST00000396394 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
PSMA1-201ENST00000396394 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
PSMA1-201ENST00000396394 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
PSMA1-201ENST00000396394 RIPK4P57078 832 aa16.6■□□□□ 0.25
PSMA1-201ENST00000396394 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
PSMA1-201ENST00000396394 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
PSMA1-201ENST00000396394 A1BGP04217 495 aa16.6■□□□□ 0.25
PSMA1-201ENST00000396394 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
PSMA1-201ENST00000396394 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
PSMA1-201ENST00000396394 DDR1Q08345 913 aa16.59■□□□□ 0.25
PSMA1-201ENST00000396394 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
PSMA1-201ENST00000396394 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
PSMA1-201ENST00000396394 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
PSMA1-201ENST00000396394 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
PSMA1-201ENST00000396394 BABAM1Q9NWV8 329 aa16.58■□□□□ 0.24
PSMA1-201ENST00000396394 RCAN3Q9UKA8 241 aa16.58■□□□□ 0.24
PSMA1-201ENST00000396394 KIF13BQ9NQT8 1826 aa16.57■□□□□ 0.24
PSMA1-201ENST00000396394 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
PSMA1-201ENST00000396394 NFIXQ14938 502 aa16.57■□□□□ 0.24
PSMA1-201ENST00000396394 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
PSMA1-201ENST00000396394 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
PSMA1-201ENST00000396394 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
PSMA1-201ENST00000396394 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
PSMA1-201ENST00000396394 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
PSMA1-201ENST00000396394 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
PSMA1-201ENST00000396394 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
PSMA1-201ENST00000396394 GIGYF1O75420 1035 aaPredicted RBP16.55■□□□□ 0.24
PSMA1-201ENST00000396394 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
PSMA1-201ENST00000396394 CHD4Q14839 1912 aa16.55■□□□□ 0.24
PSMA1-201ENST00000396394 DPEP1P16444 411 aa16.55■□□□□ 0.24
PSMA1-201ENST00000396394 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
PSMA1-201ENST00000396394 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
PSMA1-201ENST00000396394 SERPINB2P05120 415 aa16.54■□□□□ 0.24
PSMA1-201ENST00000396394 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
PSMA1-201ENST00000396394 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
PSMA1-201ENST00000396394 RGL2O15211 777 aa16.53■□□□□ 0.24
PSMA1-201ENST00000396394 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
PSMA1-201ENST00000396394 KCNA3P22001 575 aa16.53■□□□□ 0.24
PSMA1-201ENST00000396394 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
PSMA1-201ENST00000396394 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
PSMA1-201ENST00000396394 NBPF26B4DH59 902 aa16.52■□□□□ 0.24
PSMA1-201ENST00000396394 NEUROD2Q15784 382 aa16.52■□□□□ 0.24
PSMA1-201ENST00000396394 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
PSMA1-201ENST00000396394 TBC1D9BQ66K14 1250 aa16.52■□□□□ 0.24
PSMA1-201ENST00000396394 NBPF10Q6P3W6 841 aaKnown RBP16.52■□□□□ 0.24
PSMA1-201ENST00000396394 NBPF15Q8N660 670 aa16.52■□□□□ 0.24
PSMA1-201ENST00000396394 PIM2Q9P1W9 311 aa16.52■□□□□ 0.24
PSMA1-201ENST00000396394 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
PSMA1-201ENST00000396394 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
PSMA1-201ENST00000396394 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 WWC3Q9ULE0 1092 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 BCS1LQ9Y276 419 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
PSMA1-201ENST00000396394 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
PSMA1-201ENST00000396394 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
PSMA1-201ENST00000396394 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms