RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FMNL2Q96PY5 1086 aa24.52■■□□□ 1.52
LMNB1-202ENST00000395354 RBM42Q9BTD8 480 aaKnown RBP24.52■■□□□ 1.52
LMNB1-202ENST00000395354 TNNQ9UQP3 1299 aa24.52■■□□□ 1.52
LMNB1-202ENST00000395354 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
LMNB1-202ENST00000395354 SOS1Q07889 1333 aaPredicted RBP24.51■■□□□ 1.51
LMNB1-202ENST00000395354 DDX19BQ9UMR2 479 aa24.5■■□□□ 1.51
LMNB1-202ENST00000395354 PAPPAQ13219 1627 aa24.5■■□□□ 1.51
LMNB1-202ENST00000395354 ELL2O00472 640 aaPredicted RBP24.5■■□□□ 1.51
LMNB1-202ENST00000395354 SF3B2Q13435 895 aaKnown RBP24.5■■□□□ 1.51
LMNB1-202ENST00000395354 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
LMNB1-202ENST00000395354 LOC102724428A0A0B4J2F2 783 aa24.48■■□□□ 1.51
LMNB1-202ENST00000395354 PLSCR1O15162 318 aa24.48■■□□□ 1.51
LMNB1-202ENST00000395354 SIK1P57059 783 aa24.48■■□□□ 1.51
LMNB1-202ENST00000395354 CCDC125Q86Z20 511 aa24.48■■□□□ 1.51
LMNB1-202ENST00000395354 KCPQ6ZWJ8 1503 aa24.47■■□□□ 1.51
LMNB1-202ENST00000395354 HEG1Q9ULI3 1381 aa24.47■■□□□ 1.51
LMNB1-202ENST00000395354 UBR2Q8IWV8 1755 aa24.47■■□□□ 1.51
LMNB1-202ENST00000395354 GIGYF1O75420 1035 aaPredicted RBP24.46■■□□□ 1.51
LMNB1-202ENST00000395354 SNRPA1P09661 255 aaKnown RBP24.46■■□□□ 1.51
LMNB1-202ENST00000395354 VSIG10Q8N0Z9 540 aa24.46■■□□□ 1.51
LMNB1-202ENST00000395354 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
LMNB1-202ENST00000395354 API5Q9BZZ5 524 aaKnown RBP24.46■■□□□ 1.51
LMNB1-202ENST00000395354 TCERG1O14776 1098 aaKnown RBP24.46■■□□□ 1.51
LMNB1-202ENST00000395354 ATP6V1AP38606 617 aa24.46■■□□□ 1.51
LMNB1-202ENST00000395354 CHMP4BQ9H444 224 aaKnown RBP24.46■■□□□ 1.51
LMNB1-202ENST00000395354 TNS1Q9HBL0 1735 aaKnown RBP24.45■■□□□ 1.51
LMNB1-202ENST00000395354 PRAMEF22A3QJZ6 481 aa24.43■■□□□ 1.5
LMNB1-202ENST00000395354 ITPRIPQ8IWB1 547 aa24.43■■□□□ 1.5
LMNB1-202ENST00000395354 TMEM57Q8N5G2 664 aa24.43■■□□□ 1.5
LMNB1-202ENST00000395354 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
LMNB1-202ENST00000395354 KCNQ4P56696 695 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 UPF1Q92900 1129 aaKnown RBP eCLIP24.42■■□□□ 1.5
LMNB1-202ENST00000395354 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
LMNB1-202ENST00000395354 ABCC4O15439 1325 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 BAG6P46379 1132 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 EN1Q05925 392 aaPredicted RBP24.42■■□□□ 1.5
LMNB1-202ENST00000395354 TXNRD1Q16881 649 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 DNAJC10Q8IXB1 793 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 PROM2Q8N271 834 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
LMNB1-202ENST00000395354 HOXB7P09629 217 aa24.41■■□□□ 1.5
LMNB1-202ENST00000395354 SLC27A3Q5K4L6 730 aa24.41■■□□□ 1.5
LMNB1-202ENST00000395354 LY75O60449 1722 aa24.41■■□□□ 1.5
LMNB1-202ENST00000395354 PTPRCP08575 1304 aa24.41■■□□□ 1.5
LMNB1-202ENST00000395354 ITPK1Q13572 414 aa24.4■■□□□ 1.5
LMNB1-202ENST00000395354 EIF2S2P20042 333 aaKnown RBP24.39■■□□□ 1.5
LMNB1-202ENST00000395354 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.5
LMNB1-202ENST00000395354 CAMKK2Q96RR4 588 aa24.39■■□□□ 1.5
LMNB1-202ENST00000395354 STARD3NLO95772 234 aa24.38■■□□□ 1.49
LMNB1-202ENST00000395354 IGHDP01880 384 aa24.38■■□□□ 1.49
LMNB1-202ENST00000395354 CHMP4AQ9BY43 222 aa24.38■■□□□ 1.49
LMNB1-202ENST00000395354 RWDD1Q9H446 243 aaPredicted RBP24.38■■□□□ 1.49
LMNB1-202ENST00000395354 LRRC4BQ9NT99 713 aa24.38■■□□□ 1.49
LMNB1-202ENST00000395354 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
LMNB1-202ENST00000395354 EZH2Q15910 746 aaKnown RBP24.37■■□□□ 1.49
LMNB1-202ENST00000395354 ZBTB40Q9NUA8 1239 aa24.37■■□□□ 1.49
LMNB1-202ENST00000395354 NECTIN2Q92692 538 aa24.37■■□□□ 1.49
LMNB1-202ENST00000395354 CYP19A1P11511 503 aaPredicted RBP24.36■■□□□ 1.49
LMNB1-202ENST00000395354 ZNF831Q5JPB2 1677 aa24.36■■□□□ 1.49
LMNB1-202ENST00000395354 HDGFL1Q5TGJ6 251 aa24.36■■□□□ 1.49
LMNB1-202ENST00000395354 CCDC30Q5VVM6 783 aa24.36■■□□□ 1.49
LMNB1-202ENST00000395354 RBM19Q9Y4C8 960 aaKnown RBP24.36■■□□□ 1.49
LMNB1-202ENST00000395354 C5P01031 1676 aa24.35■■□□□ 1.49
LMNB1-202ENST00000395354 LINC00116Q8NCU8 138 aa24.34■■□□□ 1.49
LMNB1-202ENST00000395354 RGPD3A6NKT7 1758 aaPredicted RBP24.34■■□□□ 1.49
LMNB1-202ENST00000395354 RGPD4Q7Z3J3 1758 aa24.34■■□□□ 1.49
LMNB1-202ENST00000395354 TJP1Q07157 1748 aa24.33■■□□□ 1.49
LMNB1-202ENST00000395354 SLC4A2P04920 1241 aa24.33■■□□□ 1.49
LMNB1-202ENST00000395354 HMGB2P26583 209 aaKnown RBP24.33■■□□□ 1.49
LMNB1-202ENST00000395354 HDAC1Q13547 482 aaPredicted RBP24.33■■□□□ 1.49
LMNB1-202ENST00000395354 STK31Q9BXU1 1019 aa24.33■■□□□ 1.49
LMNB1-202ENST00000395354 ZBTB7BO15156 539 aaPredicted RBP24.33■■□□□ 1.48
LMNB1-202ENST00000395354 A1BGP04217 495 aa24.33■■□□□ 1.48
LMNB1-202ENST00000395354 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.48
LMNB1-202ENST00000395354 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
LMNB1-202ENST00000395354 CICQ96RK0 1608 aaPredicted RBP24.31■■□□□ 1.48
LMNB1-202ENST00000395354 CACNA1FO60840 1977 aa24.3■■□□□ 1.48
LMNB1-202ENST00000395354 RC3H1Q5TC82 1133 aaKnown RBP24.29■■□□□ 1.48
LMNB1-202ENST00000395354 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
LMNB1-202ENST00000395354 CCDC87Q9NVE4 849 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 CHPF2Q9P2E5 772 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 DBF4Q9UBU7 674 aaPredicted RBP24.29■■□□□ 1.48
LMNB1-202ENST00000395354 TAF1LQ8IZX4 1826 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 NBPF26B4DH59 902 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 PIP4K2AP48426 406 aaPredicted RBP24.29■■□□□ 1.48
LMNB1-202ENST00000395354 NBPF14Q5TI25 921 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 NBPF10Q6P3W6 841 aaKnown RBP24.29■■□□□ 1.48
LMNB1-202ENST00000395354 NBPF15Q8N660 670 aa24.29■■□□□ 1.48
LMNB1-202ENST00000395354 ERBB4Q15303 1308 aa24.28■■□□□ 1.48
LMNB1-202ENST00000395354 PDIA6Q15084 440 aa24.28■■□□□ 1.48
LMNB1-202ENST00000395354 COL5A3P25940 1745 aaPredicted RBP24.27■■□□□ 1.48
LMNB1-202ENST00000395354 CNTNAP4Q9C0A0 1308 aa24.27■■□□□ 1.48
LMNB1-202ENST00000395354 DDX21Q9NR30 783 aaKnown RBP eCLIP24.27■■□□□ 1.48
LMNB1-202ENST00000395354 ZBTB1Q9Y2K1 713 aa24.27■■□□□ 1.48
LMNB1-202ENST00000395354 ANXA1P04083 346 aa24.26■■□□□ 1.47
LMNB1-202ENST00000395354 MYL6BP14649 208 aa24.26■■□□□ 1.47
LMNB1-202ENST00000395354 MYH14Q7Z406 1995 aaKnown RBP24.26■■□□□ 1.47
LMNB1-202ENST00000395354 PROSER3Q2NL68 480 aa24.25■■□□□ 1.47
LMNB1-202ENST00000395354 AK7Q96M32 723 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms