RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SETDB1Q15047 1291 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 SCAND2PQ9GZW5 306 aaPredicted RBP15.45■□□□□ 0.06
USP49-203ENST00000394253 CIB2O75838 187 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 TSNAXIP1Q2TAA8 658 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 ATP2B2Q01814 1243 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
USP49-203ENST00000394253 USP47Q96K76 1375 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 ERCC6LQ2NKX8 1250 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 TSPYL2Q9H2G4 693 aaPredicted RBP15.44■□□□□ 0.06
USP49-203ENST00000394253 ZFP91Q96JP5 570 aaPredicted RBP15.44■□□□□ 0.06
USP49-203ENST00000394253 CCDC114Q96M63 670 aa15.44■□□□□ 0.06
USP49-203ENST00000394253 ARL1P40616 181 aaPredicted RBP15.43■□□□□ 0.06
USP49-203ENST00000394253 PANK3Q9H999 370 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP49-203ENST00000394253 CTNNA3Q9UI47 895 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 CAPN2P17655 700 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 DRC1Q96MC2 740 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 SAMD15Q9P1V8 674 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 CEP128Q6ZU80 1094 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 PSMD1Q99460 953 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP49-203ENST00000394253 MRVI1Q9Y6F6 885 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 A6NNZ2 444 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 TUBB8Q3ZCM7 444 aa15.43■□□□□ 0.06
USP49-203ENST00000394253 WHAMMP3Q1A5X7 153 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 KIF6Q6ZMV9 814 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 ZNF365Q70YC5 407 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
USP49-203ENST00000394253 GGT6Q6P531 493 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
USP49-203ENST00000394253 MCM4P33991 863 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
USP49-203ENST00000394253 UBAC1Q9BSL1 405 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 TTC39AQ5SRH9 613 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 BLOC1S2Q6QNY1 142 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 TRIM7Q9C029 511 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 ZC4H2Q9NQZ6 224 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
USP49-203ENST00000394253 NDC80O14777 642 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 TDRD12Q587J7 1177 aaKnown RBP15.41■□□□□ 0.06
USP49-203ENST00000394253 MPNDQ8N594 471 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 ATRIPQ8WXE1 791 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 MAP7Q14244 749 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 NECTIN2Q92692 538 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
USP49-203ENST00000394253 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 PCK1P35558 622 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
USP49-203ENST00000394253 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 KDM4AO75164 1064 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 SYTL4Q96C24 671 aaPredicted RBP15.41■□□□□ 0.06
USP49-203ENST00000394253 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
USP49-203ENST00000394253 TUBB4AP04350 444 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 TUBBP07437 444 aa15.41■□□□□ 0.06
USP49-203ENST00000394253 CTAGE9A4FU28 777 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 STX1AQ16623 288 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 FOXD1Q16676 465 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 SNX16P57768 344 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 GNAI2P04899 355 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 PDE1CQ14123 709 aaPredicted RBP15.4■□□□□ 0.06
USP49-203ENST00000394253 CPLX4Q7Z7G2 160 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
USP49-203ENST00000394253 ATP2A2P16615 1042 aaKnown RBP15.39■□□□□ 0.05
USP49-203ENST00000394253 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 CFAP157Q5JU67 520 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 SEPT8Q92599 483 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 CCDC170Q8IYT3 715 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 RGS22Q8NE09 1264 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 CCDC7Q96M83 1385 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 CCDC196A0A1B0GTZ2 297 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
USP49-203ENST00000394253 STK3Q13188 491 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
USP49-203ENST00000394253 NOP2P46087 812 aaKnown RBP15.39■□□□□ 0.05
USP49-203ENST00000394253 BUB1BO60566 1050 aaPredicted RBP15.38■□□□□ 0.05
USP49-203ENST00000394253 FMNL3Q8IVF7 1028 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 RAB3IPQ96QF0 476 aaPredicted RBP15.38■□□□□ 0.05
USP49-203ENST00000394253 ATP2C2O75185 946 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 ATP5DP30049 168 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 DNA2P51530 1060 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 VCX3AQ9NNX9 186 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
USP49-203ENST00000394253 MAP3K7CLP57077 242 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 KLHL10Q6JEL2 608 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 CCDC144CPQ8IYA2 1237 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
USP49-203ENST00000394253 TBC1D5Q92609 795 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms