RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
PTN-202ENST00000393083 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
PTN-202ENST00000393083 HEG1Q9ULI3 1381 aa17.48■□□□□ 0.39
PTN-202ENST00000393083 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
PTN-202ENST00000393083 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
PTN-202ENST00000393083 COL5A3P25940 1745 aaPredicted RBP17.47■□□□□ 0.39
PTN-202ENST00000393083 CHL1O00533 1208 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.39
PTN-202ENST00000393083 ZNF853P0CG23 659 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 RC3H1Q5TC82 1133 aaKnown RBP17.46■□□□□ 0.39
PTN-202ENST00000393083 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 CNTNAP4Q9C0A0 1308 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 KDM3BQ7LBC6 1761 aa17.46■□□□□ 0.39
PTN-202ENST00000393083 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
PTN-202ENST00000393083 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
PTN-202ENST00000393083 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
PTN-202ENST00000393083 PLIN1O60240 522 aa17.45■□□□□ 0.38
PTN-202ENST00000393083 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
PTN-202ENST00000393083 AK7Q96M32 723 aa17.45■□□□□ 0.38
PTN-202ENST00000393083 MBIPQ9NS73 344 aa17.45■□□□□ 0.38
PTN-202ENST00000393083 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
PTN-202ENST00000393083 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
PTN-202ENST00000393083 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
PTN-202ENST00000393083 TUBGCP6Q96RT7 1819 aa17.44■□□□□ 0.38
PTN-202ENST00000393083 QSER1Q2KHR3 1735 aa17.43■□□□□ 0.38
PTN-202ENST00000393083 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
PTN-202ENST00000393083 BCAR3O75815 825 aa17.43■□□□□ 0.38
PTN-202ENST00000393083 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
PTN-202ENST00000393083 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
PTN-202ENST00000393083 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
PTN-202ENST00000393083 CASZ1Q86V15 1759 aa17.43■□□□□ 0.38
PTN-202ENST00000393083 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
PTN-202ENST00000393083 GNPATO15228 680 aa17.42■□□□□ 0.38
PTN-202ENST00000393083 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
PTN-202ENST00000393083 COL23A1Q86Y22 540 aaPredicted RBP17.42■□□□□ 0.38
PTN-202ENST00000393083 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
PTN-202ENST00000393083 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
PTN-202ENST00000393083 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
PTN-202ENST00000393083 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
PTN-202ENST00000393083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.4■□□□□ 0.38
PTN-202ENST00000393083 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
PTN-202ENST00000393083 STARD3NLO95772 234 aa17.4■□□□□ 0.38
PTN-202ENST00000393083 SSFA2P28290 1259 aa17.4■□□□□ 0.38
PTN-202ENST00000393083 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
PTN-202ENST00000393083 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
PTN-202ENST00000393083 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
PTN-202ENST00000393083 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
PTN-202ENST00000393083 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
PTN-202ENST00000393083 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
PTN-202ENST00000393083 PHF14O94880 888 aa17.38■□□□□ 0.37
PTN-202ENST00000393083 A1BGP04217 495 aa17.37■□□□□ 0.37
PTN-202ENST00000393083 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
PTN-202ENST00000393083 SMC4Q9NTJ3 1288 aa17.37■□□□□ 0.37
PTN-202ENST00000393083 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
PTN-202ENST00000393083 ZBTB7AO95365 584 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 TRAPPC3LQ5T215 181 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 ARHGEF1Q92888 912 aaKnown RBP17.36■□□□□ 0.37
PTN-202ENST00000393083 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
PTN-202ENST00000393083 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
PTN-202ENST00000393083 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
PTN-202ENST00000393083 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
PTN-202ENST00000393083 C8orf58Q8NAV2 365 aa17.35■□□□□ 0.37
PTN-202ENST00000393083 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
PTN-202ENST00000393083 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
PTN-202ENST00000393083 VAMP4O75379 141 aa17.34■□□□□ 0.37
PTN-202ENST00000393083 NBPF26B4DH59 902 aa17.33■□□□□ 0.37
PTN-202ENST00000393083 ELL2O00472 640 aaPredicted RBP17.33■□□□□ 0.37
PTN-202ENST00000393083 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.37
PTN-202ENST00000393083 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.37
PTN-202ENST00000393083 NBPF15Q8N660 670 aa17.33■□□□□ 0.37
PTN-202ENST00000393083 SPON1Q9HCB6 807 aa17.33■□□□□ 0.37
PTN-202ENST00000393083 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.37
PTN-202ENST00000393083 CACNA1FO60840 1977 aa17.33■□□□□ 0.36
PTN-202ENST00000393083 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.36
PTN-202ENST00000393083 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 PTGER2P43116 358 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
PTN-202ENST00000393083 SGIP1Q9BQI5 828 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 COL15A1P39059 1388 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 HOXB7P09629 217 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 RFC4P35249 363 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
PTN-202ENST00000393083 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
PTN-202ENST00000393083 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
PTN-202ENST00000393083 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
PTN-202ENST00000393083 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
PTN-202ENST00000393083 LRP5O75197 1615 aa17.3■□□□□ 0.36
PTN-202ENST00000393083 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
PTN-202ENST00000393083 EIF2S2P20042 333 aaKnown RBP17.3■□□□□ 0.36
PTN-202ENST00000393083 PDIA6Q15084 440 aa17.3■□□□□ 0.36
PTN-202ENST00000393083 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms