RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
CIT-202ENST00000392520 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
CIT-202ENST00000392520 TRIM27P14373 513 aa17.28■□□□□ 0.36
CIT-202ENST00000392520 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
CIT-202ENST00000392520 MYZAPP0CAP1 466 aa17.28■□□□□ 0.36
CIT-202ENST00000392520 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
CIT-202ENST00000392520 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
CIT-202ENST00000392520 GJB2P29033 226 aa17.28■□□□□ 0.36
CIT-202ENST00000392520 ZNF76P36508 570 aa17.27■□□□□ 0.36
CIT-202ENST00000392520 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■■■■ 42.6
CIT-202ENST00000392520 KRT222Q8N1A0 295 aa17.27■□□□□ 0.36
CIT-202ENST00000392520 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
CIT-202ENST00000392520 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.36
CIT-202ENST00000392520 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.36
CIT-202ENST00000392520 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■□□□□ 8.6
CIT-202ENST00000392520 CCDC175P0C221 793 aa17.27■□□□□ 0.35
CIT-202ENST00000392520 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.35
CIT-202ENST00000392520 UBE2Q2Q8WVN8 375 aa17.27■□□□□ 0.35
CIT-202ENST00000392520 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.35
CIT-202ENST00000392520 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 GUCY1B3Q02153 619 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 KRI1Q8N9T8 703 aaKnown RBP17.26■□□□□ 0.35
CIT-202ENST00000392520 CPLX3Q8WVH0 158 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 ZHX1Q9UKY1 873 aaPredicted RBP17.26■□□□□ 0.35
CIT-202ENST00000392520 KIF20AO95235 890 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 SPECC1Q5M775 1068 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 MCM10Q7L590 875 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
CIT-202ENST00000392520 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 NAPBQ9H115 298 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
CIT-202ENST00000392520 PTPRCP08575 1304 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
CIT-202ENST00000392520 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 TIGD1Q96MW7 591 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
CIT-202ENST00000392520 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
CIT-202ENST00000392520 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
CIT-202ENST00000392520 LMAN1P49257 510 aa17.25■□□□□ 0.35
CIT-202ENST00000392520 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
CIT-202ENST00000392520 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
CIT-202ENST00000392520 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
CIT-202ENST00000392520 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
CIT-202ENST00000392520 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
CIT-202ENST00000392520 PROSER2Q86WR7 435 aaPredicted RBP17.25■□□□□ 0.35
CIT-202ENST00000392520 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 HCLS1P14317 486 aaPredicted RBP17.24■□□□□ 0.35
CIT-202ENST00000392520 SEC63Q9UGP8 760 aaKnown RBP17.24■□□□□ 0.35
CIT-202ENST00000392520 ZMYND15Q9H091 742 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 ZNF213O14771 459 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
CIT-202ENST00000392520 TDRD12Q587J7 1177 aaKnown RBP17.24■□□□□ 0.35
CIT-202ENST00000392520 MIS18AQ9NYP9 233 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
CIT-202ENST00000392520 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 USP5P45974 858 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 GNG11P61952 73 aa17.24■□□□□ 0.35
CIT-202ENST00000392520 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
CIT-202ENST00000392520 GOLGA8BA8MQT2 603 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
CIT-202ENST00000392520 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
CIT-202ENST00000392520 SUPT6HQ7KZ85 1726 aaKnown RBP17.23■□□□□ 0.35
CIT-202ENST00000392520 HLTFQ14527 1009 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIT-202ENST00000392520 TTC22Q5TAA0 569 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 PYM1Q9BRP8 204 aaKnown RBP17.23■□□□□ 0.35
CIT-202ENST00000392520 ZSCAN16Q9H4T2 348 aaPredicted RBP17.23■□□□□ 0.35
CIT-202ENST00000392520 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 BIN1O00499 593 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 EHBP1Q8NDI1 1231 aa17.23■□□□□ 0.35
CIT-202ENST00000392520 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
CIT-202ENST00000392520 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
CIT-202ENST00000392520 BCCIPQ9P287 314 aaKnown RBP eCLIP17.22■□□□□ 0.35
CIT-202ENST00000392520 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
CIT-202ENST00000392520 DNAAF4Q8WXU2 420 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 SPECC1LQ69YQ0 1117 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
CIT-202ENST00000392520 HMG20BQ9P0W2 317 aa17.22■□□□□ 0.35
CIT-202ENST00000392520 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 IGHDP01880 384 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 TUBB4AP04350 444 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 ZKSCAN5Q9Y2L8 839 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms