RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 ADRA2BP18089 450 aa17.31■□□□□ 0.36
MRPL55-219ENST00000391867 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
MRPL55-219ENST00000391867 RFC4P35249 363 aa17.31■□□□□ 0.36
MRPL55-219ENST00000391867 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
MRPL55-219ENST00000391867 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-219ENST00000391867 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
MRPL55-219ENST00000391867 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-219ENST00000391867 STARD3NLO95772 234 aa17.28■□□□□ 0.36
MRPL55-219ENST00000391867 MMP10P09238 476 aa17.28■□□□□ 0.36
MRPL55-219ENST00000391867 GYS1P13807 737 aa17.28■□□□□ 0.36
MRPL55-219ENST00000391867 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-219ENST00000391867 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
MRPL55-219ENST00000391867 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-219ENST00000391867 COL15A1P39059 1388 aa17.28■□□□□ 0.36
MRPL55-219ENST00000391867 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
MRPL55-219ENST00000391867 A1BGP04217 495 aa17.27■□□□□ 0.36
MRPL55-219ENST00000391867 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
MRPL55-219ENST00000391867 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
MRPL55-219ENST00000391867 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
MRPL55-219ENST00000391867 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
MRPL55-219ENST00000391867 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
MRPL55-219ENST00000391867 FKBP8Q14318 412 aa17.25■□□□□ 0.35
MRPL55-219ENST00000391867 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
MRPL55-219ENST00000391867 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-219ENST00000391867 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
MRPL55-219ENST00000391867 NLGN1Q8N2Q7 840 aa17.24■□□□□ 0.35
MRPL55-219ENST00000391867 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
MRPL55-219ENST00000391867 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
MRPL55-219ENST00000391867 APAF1O14727 1248 aa17.23■□□□□ 0.35
MRPL55-219ENST00000391867 ZPR1O75312 459 aa17.23■□□□□ 0.35
MRPL55-219ENST00000391867 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
MRPL55-219ENST00000391867 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
MRPL55-219ENST00000391867 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
MRPL55-219ENST00000391867 EIF5P55010 431 aaKnown RBP17.22■□□□□ 0.35
MRPL55-219ENST00000391867 EIF4A1P60842 406 aaKnown RBP17.22■□□□□ 0.35
MRPL55-219ENST00000391867 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
MRPL55-219ENST00000391867 DDR1Q08345 913 aa17.21■□□□□ 0.35
MRPL55-219ENST00000391867 NARFQ9UHQ1 456 aa17.21■□□□□ 0.35
MRPL55-219ENST00000391867 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
MRPL55-219ENST00000391867 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
MRPL55-219ENST00000391867 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
MRPL55-219ENST00000391867 CD2APQ9Y5K6 639 aa17.2■□□□□ 0.34
MRPL55-219ENST00000391867 PARP3Q9Y6F1 533 aa17.2■□□□□ 0.34
MRPL55-219ENST00000391867 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
MRPL55-219ENST00000391867 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-219ENST00000391867 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-219ENST00000391867 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
MRPL55-219ENST00000391867 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
MRPL55-219ENST00000391867 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
MRPL55-219ENST00000391867 GPR162Q16538 588 aa17.18■□□□□ 0.34
MRPL55-219ENST00000391867 BICDL1Q6ZP65 573 aa17.18■□□□□ 0.34
MRPL55-219ENST00000391867 A0A087WZG4 1122 aa17.17■□□□□ 0.34
MRPL55-219ENST00000391867 NFIXQ14938 502 aa17.17■□□□□ 0.34
MRPL55-219ENST00000391867 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
MRPL55-219ENST00000391867 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
MRPL55-219ENST00000391867 C10orf71Q711Q0 1435 aa17.16■□□□□ 0.34
MRPL55-219ENST00000391867 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
MRPL55-219ENST00000391867 TM4SF1P30408 202 aa17.16■□□□□ 0.34
MRPL55-219ENST00000391867 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
MRPL55-219ENST00000391867 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
MRPL55-219ENST00000391867 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
MRPL55-219ENST00000391867 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
MRPL55-219ENST00000391867 YBX3P16989 372 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■□□□□ 10.7
MRPL55-219ENST00000391867 TBC1D9BQ66K14 1250 aa17.15■□□□□ 0.34
MRPL55-219ENST00000391867 CHL1O00533 1208 aa17.14■□□□□ 0.33
MRPL55-219ENST00000391867 MYL6BP14649 208 aa17.14■□□□□ 0.33
MRPL55-219ENST00000391867 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
MRPL55-219ENST00000391867 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
MRPL55-219ENST00000391867 PXDNLA1KZ92 1463 aa17.13■□□□□ 0.33
MRPL55-219ENST00000391867 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
MRPL55-219ENST00000391867 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
MRPL55-219ENST00000391867 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
MRPL55-219ENST00000391867 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-219ENST00000391867 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
MRPL55-219ENST00000391867 SERPINB2P05120 415 aa17.12■□□□□ 0.33
MRPL55-219ENST00000391867 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
MRPL55-219ENST00000391867 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-219ENST00000391867 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
MRPL55-219ENST00000391867 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
MRPL55-219ENST00000391867 ANXA1P04083 346 aa17.11■□□□□ 0.33
MRPL55-219ENST00000391867 DPEP1P16444 411 aa17.11■□□□□ 0.33
MRPL55-219ENST00000391867 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
MRPL55-219ENST00000391867 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
MRPL55-219ENST00000391867 AFDNP55196 1824 aaKnown RBP17.11■□□□□ 0.33
MRPL55-219ENST00000391867 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
MRPL55-219ENST00000391867 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
MRPL55-219ENST00000391867 CHRNA5P30532 468 aa17.09■□□□□ 0.33
MRPL55-219ENST00000391867 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
MRPL55-219ENST00000391867 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 YY1P25490 414 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 TGFB2P61812 414 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 PDIA6Q15084 440 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 HLFQ16534 295 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
MRPL55-219ENST00000391867 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
MRPL55-219ENST00000391867 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
MRPL55-219ENST00000391867 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
MRPL55-219ENST00000391867 SETDB2Q96T68 719 aa17.07■□□□□ 0.32
MRPL55-219ENST00000391867 ZBTB3Q9H5J0 574 aa17.07■□□□□ 0.32
MRPL55-219ENST00000391867 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms