RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
SNORA40.4-201ENST00000390971 TSPAN10Q9H1Z9 355 aaPredicted RBP11.57□□□□□ -0.56
SNORA40.4-201ENST00000390971 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
SNORA40.4-201ENST00000390971 MSX1P28360 303 aa11.56□□□□□ -0.56
SNORA40.4-201ENST00000390971 NBPF1Q3BBV0 1214 aa11.56□□□□□ -0.56
SNORA40.4-201ENST00000390971 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
SNORA40.4-201ENST00000390971 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 NOS2P35228 1153 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 PSMA6P60900 246 aaKnown RBP11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 TBCELQ5QJ74 424 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 VWA5B2Q8N398 1253 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 C1orf216Q8TAB5 229 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 L3MBTL2Q969R5 705 aa11.55□□□□□ -0.56
SNORA40.4-201ENST00000390971 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
SNORA40.4-201ENST00000390971 SERTM1A2A2V5 107 aa11.54□□□□□ -0.56
SNORA40.4-201ENST00000390971 SCG3Q8WXD2 468 aaKnown RBP11.54□□□□□ -0.56
SNORA40.4-201ENST00000390971 ARID3AQ99856 593 aa11.54□□□□□ -0.56
SNORA40.4-201ENST00000390971 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
SNORA40.4-201ENST00000390971 CDC14CA4D256 554 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 ZDHHC1Q8WTX9 485 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 GPAMQ9HCL2 828 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 CUEDC1Q9NWM3 386 aaPredicted RBP11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 ZDHHC3Q9NYG2 299 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
SNORA40.4-201ENST00000390971 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 DBN1Q16643 649 aa11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 STAG2Q8N3U4 1231 aa11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
SNORA40.4-201ENST00000390971 C21orf2O43822 256 aa11.51□□□□□ -0.57
SNORA40.4-201ENST00000390971 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
SNORA40.4-201ENST00000390971 IGFBP4P22692 258 aa11.5□□□□□ -0.57
SNORA40.4-201ENST00000390971 LBRQ14739 615 aaKnown RBP11.5□□□□□ -0.57
SNORA40.4-201ENST00000390971 STK32AQ8WU08 396 aa11.5□□□□□ -0.57
SNORA40.4-201ENST00000390971 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
SNORA40.4-201ENST00000390971 EML1O00423 815 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 LGR5O75473 907 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 ZNF837Q96EG3 531 aaPredicted RBP11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 CRISPLD1Q9H336 500 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 RUBCNLQ9H714 662 aa11.49□□□□□ -0.57
SNORA40.4-201ENST00000390971 WEE1P30291 646 aa11.48□□□□□ -0.57
SNORA40.4-201ENST00000390971 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
SNORA40.4-201ENST00000390971 ARSJQ5FYB0 599 aaPredicted RBP11.48□□□□□ -0.57
SNORA40.4-201ENST00000390971 TMEM164Q5U3C3 297 aa11.48□□□□□ -0.57
SNORA40.4-201ENST00000390971 C2orf49Q9BVC5 232 aaPredicted RBP11.48□□□□□ -0.57
SNORA40.4-201ENST00000390971 ATP4AP20648 1035 aa11.47□□□□□ -0.57
SNORA40.4-201ENST00000390971 TXLNAP40222 546 aa11.47□□□□□ -0.57
SNORA40.4-201ENST00000390971 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
SNORA40.4-201ENST00000390971 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
SNORA40.4-201ENST00000390971 GPR161Q8N6U8 529 aaKnown RBP11.47□□□□□ -0.57
SNORA40.4-201ENST00000390971 GMPRP36959 345 aa11.46□□□□□ -0.57
SNORA40.4-201ENST00000390971 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
SNORA40.4-201ENST00000390971 HCN4Q9Y3Q4 1203 aa11.46□□□□□ -0.57
SNORA40.4-201ENST00000390971 NLRP8Q86W28 1048 aa11.45□□□□□ -0.58
SNORA40.4-201ENST00000390971 GTPBP3Q969Y2 492 aaKnown RBP11.45□□□□□ -0.58
SNORA40.4-201ENST00000390971 TRERF1Q96PN7 1200 aa11.45□□□□□ -0.58
SNORA40.4-201ENST00000390971 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
SNORA40.4-201ENST00000390971 GPC6Q9Y625 555 aaPredicted RBP11.45□□□□□ -0.58
SNORA40.4-201ENST00000390971 A0A1W2PNR3 127 aa11.44□□□□□ -0.58
SNORA40.4-201ENST00000390971 FOXO3O43524 673 aa11.44□□□□□ -0.58
SNORA40.4-201ENST00000390971 SH3PXD2AQ5TCZ1 1133 aa11.44□□□□□ -0.58
SNORA40.4-201ENST00000390971 FIGNL1Q6PIW4 674 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 CLP1Q92989 425 aaKnown RBP11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 VTI1AQ96AJ9 217 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 PHACTR1Q9C0D0 580 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 NEUROD4Q9HD90 331 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
SNORA40.4-201ENST00000390971 WIPF1O43516 503 aa11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 PRMT3O60678 531 aa11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 CFHR5Q9BXR6 569 aa11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
SNORA40.4-201ENST00000390971 THBS1P07996 1170 aa11.41□□□□□ -0.58
SNORA40.4-201ENST00000390971 ALDH16A1Q8IZ83 802 aa11.41□□□□□ -0.58
SNORA40.4-201ENST00000390971 RHPN1Q8TCX5 695 aa11.41□□□□□ -0.58
SNORA40.4-201ENST00000390971 OCLNQ16625 522 aa11.4□□□□□ -0.58
SNORA40.4-201ENST00000390971 ZCCHC2Q9C0B9 1178 aaKnown RBP11.4□□□□□ -0.58
SNORA40.4-201ENST00000390971 PCDHGC4Q9Y5F7 938 aa11.4□□□□□ -0.58
SNORA40.4-201ENST00000390971 GPR25O00155 361 aa11.39□□□□□ -0.59
SNORA40.4-201ENST00000390971 UBAP2LQ14157 1087 aaKnown RBP11.39□□□□□ -0.59
SNORA40.4-201ENST00000390971 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
SNORA40.4-201ENST00000390971 ANKIB1Q9P2G1 1089 aa11.39□□□□□ -0.59
SNORA40.4-201ENST00000390971 ATXN7O15265 892 aaPredicted RBP11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 HIF1AQ16665 826 aa11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 RTN1Q16799 776 aa11.37□□□□□ -0.59
SNORA40.4-201ENST00000390971 LRRC69Q6ZNQ3 347 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms