RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NLGN2Q8NFZ4 835 aa15.09■□□□□ 0.01
IGHV4-28-201ENST00000390612 KIAA1551Q9HCM1 1747 aa15.09■□□□□ 0.01
IGHV4-28-201ENST00000390612 STARD3NLO95772 234 aa15.08■□□□□ 0
IGHV4-28-201ENST00000390612 MMP10P09238 476 aa15.08■□□□□ 0
IGHV4-28-201ENST00000390612 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
IGHV4-28-201ENST00000390612 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
IGHV4-28-201ENST00000390612 TMPOP42166 694 aaKnown RBP15.07■□□□□ 0
IGHV4-28-201ENST00000390612 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
IGHV4-28-201ENST00000390612 AFDNP55196 1824 aaKnown RBP15.07■□□□□ 0
IGHV4-28-201ENST00000390612 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
IGHV4-28-201ENST00000390612 TM4SF1P30408 202 aa15.06■□□□□ 0
IGHV4-28-201ENST00000390612 FKBP8Q14318 412 aa15.06■□□□□ 0
IGHV4-28-201ENST00000390612 NARFQ9UHQ1 456 aa15.06■□□□□ 0
IGHV4-28-201ENST00000390612 USP16Q9Y5T5 823 aa15.06■□□□□ 0
IGHV4-28-201ENST00000390612 COL15A1P39059 1388 aa15.06■□□□□ 0
IGHV4-28-201ENST00000390612 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
IGHV4-28-201ENST00000390612 RUNDC1Q96C34 613 aa15.05■□□□□ -0
IGHV4-28-201ENST00000390612 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
IGHV4-28-201ENST00000390612 BCL2L12Q9HB09 334 aa15.05■□□□□ -0
IGHV4-28-201ENST00000390612 LAMB4A4D0S4 1761 aa15.05■□□□□ -0
IGHV4-28-201ENST00000390612 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ -0
IGHV4-28-201ENST00000390612 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 PRAMEF22A3QJZ6 481 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 A1BGP04217 495 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
IGHV4-28-201ENST00000390612 IL6STP40189 918 aaPredicted RBP15.04■□□□□ -0
IGHV4-28-201ENST00000390612 RIPK4P57078 832 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 KLHL34Q8N239 644 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 PNISRQ8TF01 805 aaKnown RBP15.04■□□□□ -0
IGHV4-28-201ENST00000390612 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
IGHV4-28-201ENST00000390612 N4BP2Q86UW6 1770 aaPredicted RBP15.03■□□□□ -0
IGHV4-28-201ENST00000390612 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
IGHV4-28-201ENST00000390612 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
IGHV4-28-201ENST00000390612 DDR1Q08345 913 aa15.03■□□□□ -0
IGHV4-28-201ENST00000390612 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
IGHV4-28-201ENST00000390612 USPL1Q5W0Q7 1092 aa15.03■□□□□ -0
IGHV4-28-201ENST00000390612 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
IGHV4-28-201ENST00000390612 SCN7AQ01118 1682 aa15.03■□□□□ -0
IGHV4-28-201ENST00000390612 ZPR1O75312 459 aa15.02■□□□□ -0
IGHV4-28-201ENST00000390612 EIF4A1P60842 406 aaKnown RBP15.02■□□□□ -0
IGHV4-28-201ENST00000390612 CCDC184Q52MB2 194 aa15.02■□□□□ -0
IGHV4-28-201ENST00000390612 BABAM1Q9NWV8 329 aa15.02■□□□□ -0
IGHV4-28-201ENST00000390612 TRIM35Q9UPQ4 493 aa15.02■□□□□ -0
IGHV4-28-201ENST00000390612 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
IGHV4-28-201ENST00000390612 A0A087WZG4 1122 aa15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 GIGYF1O75420 1035 aaPredicted RBP15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 YBX3P16989 372 aaKnown RBP eCLIP15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 PARP3Q9Y6F1 533 aa15.01□□□□□ -0.01
IGHV4-28-201ENST00000390612 NBPF26B4DH59 902 aa15□□□□□ -0.01
IGHV4-28-201ENST00000390612 NFIXQ14938 502 aa15□□□□□ -0.01
IGHV4-28-201ENST00000390612 GPR162Q16538 588 aa15□□□□□ -0.01
IGHV4-28-201ENST00000390612 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
IGHV4-28-201ENST00000390612 NBPF15Q8N660 670 aa15□□□□□ -0.01
IGHV4-28-201ENST00000390612 PXDNLA1KZ92 1463 aa15□□□□□ -0.01
IGHV4-28-201ENST00000390612 TGFB2P61812 414 aa14.99□□□□□ -0.01
IGHV4-28-201ENST00000390612 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
IGHV4-28-201ENST00000390612 CAMTA2O94983 1202 aa14.98□□□□□ -0.01
IGHV4-28-201ENST00000390612 NUP98P52948 1817 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 ARFGEF1Q9Y6D6 1849 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 CHL1O00533 1208 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 RGL2O15211 777 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 KCNA3P22001 575 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 TBC1D2BQ9UPU7 963 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 ANKRD31Q8N7Z5 1873 aa14.97□□□□□ -0.01
IGHV4-28-201ENST00000390612 GRIN3BO60391 1043 aa14.96□□□□□ -0.01
IGHV4-28-201ENST00000390612 YY1P25490 414 aa14.96□□□□□ -0.01
IGHV4-28-201ENST00000390612 PIP4K2AP48426 406 aaPredicted RBP14.96□□□□□ -0.01
IGHV4-28-201ENST00000390612 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
IGHV4-28-201ENST00000390612 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
IGHV4-28-201ENST00000390612 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
IGHV4-28-201ENST00000390612 APAF1O14727 1248 aa14.95□□□□□ -0.02
IGHV4-28-201ENST00000390612 TBC1D9BQ66K14 1250 aa14.95□□□□□ -0.02
IGHV4-28-201ENST00000390612 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
IGHV4-28-201ENST00000390612 DLEC1Q9Y238 1755 aa14.95□□□□□ -0.02
IGHV4-28-201ENST00000390612 ANP32CO43423 234 aa14.94□□□□□ -0.02
IGHV4-28-201ENST00000390612 SERPINB2P05120 415 aa14.94□□□□□ -0.02
IGHV4-28-201ENST00000390612 DPEP1P16444 411 aa14.94□□□□□ -0.02
IGHV4-28-201ENST00000390612 CLEC4GQ6UXB4 293 aa14.94□□□□□ -0.02
IGHV4-28-201ENST00000390612 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
IGHV4-28-201ENST00000390612 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
IGHV4-28-201ENST00000390612 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
IGHV4-28-201ENST00000390612 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
IGHV4-28-201ENST00000390612 ERBB4Q15303 1308 aa14.92□□□□□ -0.02
IGHV4-28-201ENST00000390612 PDIA6Q15084 440 aa14.92□□□□□ -0.02
IGHV4-28-201ENST00000390612 CFAP44Q96MT7 982 aa14.92□□□□□ -0.02
IGHV4-28-201ENST00000390612 NPM2Q86SE8 214 aaKnown RBP14.91□□□□□ -0.02
IGHV4-28-201ENST00000390612 CARMIL3Q8ND23 1372 aa14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 BICDL1Q6ZP65 573 aa14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 SETDB2Q96T68 719 aa14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 SBF1O95248 1867 aa14.9□□□□□ -0.02
IGHV4-28-201ENST00000390612 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
IGHV4-28-201ENST00000390612 HLFQ16534 295 aa14.89□□□□□ -0.03
IGHV4-28-201ENST00000390612 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
IGHV4-28-201ENST00000390612 PRR5LQ6MZQ0 368 aa14.89□□□□□ -0.03
IGHV4-28-201ENST00000390612 HOXB7P09629 217 aa14.88□□□□□ -0.03
IGHV4-28-201ENST00000390612 CHRNA5P30532 468 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms