RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
SCFD2-201ENST00000388940 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 ANAPC15P60006 121 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 AK9Q5TCS8 1911 aa18.28■□□□□ 0.52
SCFD2-201ENST00000388940 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SCFD2-201ENST00000388940 TSHZ3Q63HK5 1081 aa18.28■□□□□ 0.52
SCFD2-201ENST00000388940 ADCY9O60503 1353 aa18.28■□□□□ 0.52
SCFD2-201ENST00000388940 MCCP23508 829 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 MCM2P49736 904 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 MRE11P49959 708 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 KRT28Q7Z3Y7 464 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
SCFD2-201ENST00000388940 BAG4O95429 457 aaKnown RBP18.27■□□□□ 0.52
SCFD2-201ENST00000388940 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
SCFD2-201ENST00000388940 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.52
SCFD2-201ENST00000388940 C1orf167Q5SNV9 1468 aa18.27■□□□□ 0.51
SCFD2-201ENST00000388940 RGPD5Q99666 1765 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 ALS2Q96Q42 1657 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
SCFD2-201ENST00000388940 MTX1Q13505 466 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 FAM43AQ8N2R8 423 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
SCFD2-201ENST00000388940 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
SCFD2-201ENST00000388940 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
SCFD2-201ENST00000388940 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
SCFD2-201ENST00000388940 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
SCFD2-201ENST00000388940 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
SCFD2-201ENST00000388940 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
SCFD2-201ENST00000388940 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
SCFD2-201ENST00000388940 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
SCFD2-201ENST00000388940 KSR2Q6VAB6 950 aa18.23■□□□□ 0.51
SCFD2-201ENST00000388940 UNC5CLQ8IV45 518 aa18.23■□□□□ 0.51
SCFD2-201ENST00000388940 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
SCFD2-201ENST00000388940 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
SCFD2-201ENST00000388940 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
SCFD2-201ENST00000388940 NEK4P51957 841 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 NUTM1Q86Y26 1132 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 PKNOX2Q96KN3 472 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 GRPEL1Q9HAV7 217 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
SCFD2-201ENST00000388940 SCN11AQ9UI33 1791 aa18.21■□□□□ 0.51
SCFD2-201ENST00000388940 ERBB3P21860 1342 aa18.21■□□□□ 0.51
SCFD2-201ENST00000388940 ANXA1P04083 346 aa18.21■□□□□ 0.51
SCFD2-201ENST00000388940 LMOD2Q6P5Q4 547 aa18.21■□□□□ 0.51
SCFD2-201ENST00000388940 ABCC6O95255 1503 aa18.21■□□□□ 0.51
SCFD2-201ENST00000388940 CUL4AQ13619 759 aa18.21■□□□□ 0.5
SCFD2-201ENST00000388940 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.5
SCFD2-201ENST00000388940 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.5
SCFD2-201ENST00000388940 TTC41PQ6P2S7 1318 aa18.2■□□□□ 0.5
SCFD2-201ENST00000388940 TMX3Q96JJ7 454 aa18.2■□□□□ 0.5
SCFD2-201ENST00000388940 PALD1Q9ULE6 856 aa18.2■□□□□ 0.5
SCFD2-201ENST00000388940 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
SCFD2-201ENST00000388940 HSPA4P34932 840 aa18.19■□□□□ 0.5
SCFD2-201ENST00000388940 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
SCFD2-201ENST00000388940 UTYO14607 1347 aa18.19■□□□□ 0.5
SCFD2-201ENST00000388940 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 CNTROBQ8N137 903 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCFD2-201ENST00000388940 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 COL18A1P39060 1754 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
SCFD2-201ENST00000388940 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
SCFD2-201ENST00000388940 SGSM2O43147 1006 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 PKP1Q13835 747 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCFD2-201ENST00000388940 DCCP43146 1447 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 DDX58O95786 925 aaKnown RBP18.17■□□□□ 0.5
SCFD2-201ENST00000388940 GAS2L3Q86XJ1 694 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 LMBRD1Q9NUN5 540 aa18.17■□□□□ 0.5
SCFD2-201ENST00000388940 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
SCFD2-201ENST00000388940 GLRX3O76003 335 aaKnown RBP18.16■□□□□ 0.5
SCFD2-201ENST00000388940 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
SCFD2-201ENST00000388940 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
SCFD2-201ENST00000388940 PDIA6Q15084 440 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
SCFD2-201ENST00000388940 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 ARXQ96QS3 562 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 IL25Q9H293 177 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 RAD50Q92878 1312 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 PRAMEF22A3QJZ6 481 aa18.15■□□□□ 0.5
SCFD2-201ENST00000388940 ZNF790Q6PG37 636 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 C5P01031 1676 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 GRM8O00222 908 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
SCFD2-201ENST00000388940 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
SCFD2-201ENST00000388940 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
SCFD2-201ENST00000388940 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms