RNA–Protein interactions for RNA: ENST00000381582.3

GABRB1-202, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 2

Gene GABRB1, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-202ENST00000381582 TJP1Q07157 1748 aa20.17■□□□□ 0.82
GABRB1-202ENST00000381582 ZPR1O75312 459 aa20.17■□□□□ 0.82
GABRB1-202ENST00000381582 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
GABRB1-202ENST00000381582 CCDC27Q2M243 656 aa20.17■□□□□ 0.82
GABRB1-202ENST00000381582 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
GABRB1-202ENST00000381582 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
GABRB1-202ENST00000381582 PTGER2P43116 358 aa20.16■□□□□ 0.82
GABRB1-202ENST00000381582 GNAI1P63096 354 aa20.16■□□□□ 0.82
GABRB1-202ENST00000381582 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
GABRB1-202ENST00000381582 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
GABRB1-202ENST00000381582 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
GABRB1-202ENST00000381582 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
GABRB1-202ENST00000381582 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
GABRB1-202ENST00000381582 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
GABRB1-202ENST00000381582 EIF4A1P60842 406 aaKnown RBP20.14■□□□□ 0.81
GABRB1-202ENST00000381582 SGIP1Q9BQI5 828 aa20.14■□□□□ 0.81
GABRB1-202ENST00000381582 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
GABRB1-202ENST00000381582 COL15A1P39059 1388 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 CHL1O00533 1208 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 KCNQ3O43525 872 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
GABRB1-202ENST00000381582 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
GABRB1-202ENST00000381582 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 IFT57Q9NWB7 429 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
GABRB1-202ENST00000381582 USP42Q9H9J4 1324 aaKnown RBP20.12■□□□□ 0.81
GABRB1-202ENST00000381582 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
GABRB1-202ENST00000381582 HOXB7P09629 217 aa20.12■□□□□ 0.81
GABRB1-202ENST00000381582 MIS18AQ9NYP9 233 aa20.12■□□□□ 0.81
GABRB1-202ENST00000381582 NARFQ9UHQ1 456 aa20.12■□□□□ 0.81
GABRB1-202ENST00000381582 RGL2O15211 777 aa20.11■□□□□ 0.81
GABRB1-202ENST00000381582 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
GABRB1-202ENST00000381582 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
GABRB1-202ENST00000381582 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
GABRB1-202ENST00000381582 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
GABRB1-202ENST00000381582 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
GABRB1-202ENST00000381582 IL16Q14005 1332 aa20.09■□□□□ 0.81
GABRB1-202ENST00000381582 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
GABRB1-202ENST00000381582 PARP3Q9Y6F1 533 aa20.09■□□□□ 0.81
GABRB1-202ENST00000381582 GYS1P13807 737 aa20.08■□□□□ 0.81
GABRB1-202ENST00000381582 MSL1Q68DK7 614 aa20.08■□□□□ 0.81
GABRB1-202ENST00000381582 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
GABRB1-202ENST00000381582 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
GABRB1-202ENST00000381582 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
GABRB1-202ENST00000381582 A1BGP04217 495 aa20.07■□□□□ 0.8
GABRB1-202ENST00000381582 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
GABRB1-202ENST00000381582 WDR63Q8IWG1 891 aa20.07■□□□□ 0.8
GABRB1-202ENST00000381582 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
GABRB1-202ENST00000381582 FHDC1Q9C0D6 1143 aaPredicted RBP20.06■□□□□ 0.8
GABRB1-202ENST00000381582 MMP10P09238 476 aa20.05■□□□□ 0.8
GABRB1-202ENST00000381582 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
GABRB1-202ENST00000381582 CLEC4GQ6UXB4 293 aa20.05■□□□□ 0.8
GABRB1-202ENST00000381582 DZIP3Q86Y13 1208 aaKnown RBP20.05■□□□□ 0.8
GABRB1-202ENST00000381582 SYT17Q9BSW7 474 aa20.05■□□□□ 0.8
GABRB1-202ENST00000381582 LAMB4A4D0S4 1761 aa20.04■□□□□ 0.8
GABRB1-202ENST00000381582 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
GABRB1-202ENST00000381582 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
GABRB1-202ENST00000381582 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
GABRB1-202ENST00000381582 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
GABRB1-202ENST00000381582 C4AP0C0L4 1744 aa20.02■□□□□ 0.8
GABRB1-202ENST00000381582 SMIM5Q71RC9 77 aa20.02■□□□□ 0.8
GABRB1-202ENST00000381582 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
GABRB1-202ENST00000381582 PRAMEF22A3QJZ6 481 aa20.01■□□□□ 0.79
GABRB1-202ENST00000381582 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
GABRB1-202ENST00000381582 ERVV-1B6SEH8 477 aa20■□□□□ 0.79
GABRB1-202ENST00000381582 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
GABRB1-202ENST00000381582 FKBP8Q14318 412 aa20■□□□□ 0.79
GABRB1-202ENST00000381582 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
GABRB1-202ENST00000381582 TBC1D2BQ9UPU7 963 aa20■□□□□ 0.79
GABRB1-202ENST00000381582 TM4SF1P30408 202 aa19.99■□□□□ 0.79
GABRB1-202ENST00000381582 TGFB2P61812 414 aa19.99■□□□□ 0.79
GABRB1-202ENST00000381582 SETDB2Q96T68 719 aa19.99■□□□□ 0.79
GABRB1-202ENST00000381582 DBF4Q9UBU7 674 aaPredicted RBP19.99■□□□□ 0.79
GABRB1-202ENST00000381582 PDZRN3Q9UPQ7 1066 aa19.99■□□□□ 0.79
GABRB1-202ENST00000381582 DUSP27Q5VZP5 1158 aa19.98■□□□□ 0.79
GABRB1-202ENST00000381582 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
GABRB1-202ENST00000381582 CARMIL3Q8ND23 1372 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 NBPF26B4DH59 902 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 NPHP1O15259 732 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 CAMTA2O94983 1202 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 MYL6BP14649 208 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 NBPF10Q6P3W6 841 aaKnown RBP19.97■□□□□ 0.79
GABRB1-202ENST00000381582 NBPF15Q8N660 670 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
GABRB1-202ENST00000381582 NFIXQ14938 502 aa19.96■□□□□ 0.79
GABRB1-202ENST00000381582 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
GABRB1-202ENST00000381582 POLRMTO00411 1230 aaKnown RBP19.95■□□□□ 0.78
GABRB1-202ENST00000381582 HSP90AB3PQ58FF7 597 aa19.95■□□□□ 0.78
GABRB1-202ENST00000381582 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
GABRB1-202ENST00000381582 SERPINB2P05120 415 aa19.94■□□□□ 0.78
GABRB1-202ENST00000381582 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
GABRB1-202ENST00000381582 BCL2L12Q9HB09 334 aa19.94■□□□□ 0.78
GABRB1-202ENST00000381582 SALL2Q9Y467 1007 aaPredicted RBP19.94■□□□□ 0.78
GABRB1-202ENST00000381582 SCN7AQ01118 1682 aa19.94■□□□□ 0.78
GABRB1-202ENST00000381582 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
GABRB1-202ENST00000381582 GRIN3BO60391 1043 aa19.92■□□□□ 0.78
GABRB1-202ENST00000381582 PIP4K2AP48426 406 aaPredicted RBP19.92■□□□□ 0.78
GABRB1-202ENST00000381582 ST5P78524 1137 aa19.92■□□□□ 0.78
GABRB1-202ENST00000381582 GPR162Q16538 588 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms