RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.06
PUDP-201ENST00000381077 PHAXQ9H814 394 aaKnown RBP15.46■□□□□ 0.06
PUDP-201ENST00000381077 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
PUDP-201ENST00000381077 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
PUDP-201ENST00000381077 ANKRD24Q8TF21 1146 aa15.45■□□□□ 0.06
PUDP-201ENST00000381077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
PUDP-201ENST00000381077 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
PUDP-201ENST00000381077 TTC41PQ6P2S7 1318 aa15.44■□□□□ 0.06
PUDP-201ENST00000381077 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
PUDP-201ENST00000381077 ADCY9O60503 1353 aa15.44■□□□□ 0.06
PUDP-201ENST00000381077 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
PUDP-201ENST00000381077 RHPN1Q8TCX5 695 aa15.44■□□□□ 0.06
PUDP-201ENST00000381077 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
PUDP-201ENST00000381077 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
PUDP-201ENST00000381077 PXDNQ92626 1479 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 ERC1Q8IUD2 1116 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 ERBB3P21860 1342 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 PI4KAP2A4QPH2 592 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
PUDP-201ENST00000381077 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 PI4KAP1Q8N8J0 262 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
PUDP-201ENST00000381077 UTYO14607 1347 aa15.42■□□□□ 0.06
PUDP-201ENST00000381077 SRGAP3O43295 1099 aa15.42■□□□□ 0.06
PUDP-201ENST00000381077 SURF6O75683 361 aaKnown RBP15.42■□□□□ 0.06
PUDP-201ENST00000381077 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
PUDP-201ENST00000381077 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
PUDP-201ENST00000381077 SCN11AQ9UI33 1791 aa15.42■□□□□ 0.06
PUDP-201ENST00000381077 CUL4AQ13619 759 aa15.41■□□□□ 0.06
PUDP-201ENST00000381077 LRRC59Q96AG4 307 aaKnown RBP15.41■□□□□ 0.06
PUDP-201ENST00000381077 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
PUDP-201ENST00000381077 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
PUDP-201ENST00000381077 SSFA2P28290 1259 aa15.41■□□□□ 0.06
PUDP-201ENST00000381077 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
PUDP-201ENST00000381077 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
PUDP-201ENST00000381077 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
PUDP-201ENST00000381077 PI4K2BQ8TCG2 481 aa15.4■□□□□ 0.06
PUDP-201ENST00000381077 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
PUDP-201ENST00000381077 MRC1P22897 1456 aa15.4■□□□□ 0.06
PUDP-201ENST00000381077 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
PUDP-201ENST00000381077 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
PUDP-201ENST00000381077 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
PUDP-201ENST00000381077 NBPF7P0C2Y1 421 aaPredicted RBP15.39■□□□□ 0.05
PUDP-201ENST00000381077 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
PUDP-201ENST00000381077 GRPEL1Q9HAV7 217 aa15.39■□□□□ 0.05
PUDP-201ENST00000381077 HSPA4P34932 840 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 COL18A1P39060 1754 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 KCNQ3O43525 872 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 NEK4P51957 841 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
PUDP-201ENST00000381077 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 RAD50Q92878 1312 aa15.38■□□□□ 0.05
PUDP-201ENST00000381077 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 SPG7Q9UQ90 795 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 COL15A1P39059 1388 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 SGSM2O43147 1006 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 GZF1Q9H116 711 aaPredicted RBP15.37■□□□□ 0.05
PUDP-201ENST00000381077 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 C9orf78Q9NZ63 289 aaPredicted RBP15.37■□□□□ 0.05
PUDP-201ENST00000381077 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
PUDP-201ENST00000381077 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
PUDP-201ENST00000381077 PKD1L3Q7Z443 1732 aa15.36■□□□□ 0.05
PUDP-201ENST00000381077 RBM33Q96EV2 1170 aaKnown RBP15.36■□□□□ 0.05
PUDP-201ENST00000381077 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
PUDP-201ENST00000381077 PARP4Q9UKK3 1724 aaKnown RBP15.36■□□□□ 0.05
PUDP-201ENST00000381077 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
PUDP-201ENST00000381077 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 AXIN2Q9Y2T1 843 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 CPDO75976 1380 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 GRM8O00222 908 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 HIP1O00291 1037 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 ATF3P18847 181 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 ZNF445P59923 1031 aa15.35■□□□□ 0.05
PUDP-201ENST00000381077 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
PUDP-201ENST00000381077 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 ZNF790Q6PG37 636 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
PUDP-201ENST00000381077 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 UNC5CLQ8IV45 518 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 ECHDC1Q9NTX5 307 aa15.34■□□□□ 0.05
PUDP-201ENST00000381077 KDM6AO15550 1401 aaPredicted RBP15.33■□□□□ 0.04
PUDP-201ENST00000381077 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
PUDP-201ENST00000381077 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
PUDP-201ENST00000381077 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
PUDP-201ENST00000381077 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
PUDP-201ENST00000381077 BRD1O95696 1058 aa15.32■□□□□ 0.04
PUDP-201ENST00000381077 PHKG2P15735 406 aa15.32■□□□□ 0.04
PUDP-201ENST00000381077 OS9Q13438 667 aaPredicted RBP15.32■□□□□ 0.04
PUDP-201ENST00000381077 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
PUDP-201ENST00000381077 MBD3O95983 291 aa15.32■□□□□ 0.04
PUDP-201ENST00000381077 NEXNQ0ZGT2 675 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms