RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 PALD1Q9ULE6 856 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 DIP2CQ9Y2E4 1556 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 TULP2O00295 520 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 SLU7O95391 586 aaKnown RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 F13A1P00488 732 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 TPM4P67936 248 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 SAMD1Q6SPF0 538 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 CKAP2LQ8IYA6 745 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 RASSF4Q9H2L5 321 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 TRMT1Q9NXH9 659 aaKnown RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 RSPH14Q9UHP6 348 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 ABCC3O15438 1527 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 ABCC4O15439 1325 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 CCDC171Q6TFL3 1326 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 DNM1Q05193 864 aaKnown RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 TYRO3Q06418 890 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 CDK19Q9BWU1 502 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 ARGLU1Q9NWB6 273 aaPredicted RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 FEZ2Q9UHY8 353 aaPredicted RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 ZC3H13Q5T200 1668 aaKnown RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 CLTCL1P53675 1640 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 SYT1P21579 422 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 PDE1AP54750 535 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 TNRQ92752 1358 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 CYP2C19P33261 490 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 HDGFP51858 240 aaKnown RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 ANO6Q4KMQ2 910 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 TSHZ3Q63HK5 1081 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 CWC15Q9P013 229 aaKnown RBP8.63□□□□□ -1.03
TRIM6-202ENST00000380097 IQGAP3Q86VI3 1631 aa8.63□□□□□ -1.03
TRIM6-202ENST00000380097 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 MYCNP04198 464 aaPredicted RBP8.62□□□□□ -1.03
TRIM6-202ENST00000380097 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM6-202ENST00000380097 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 FCHSD2O94868 740 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 ZNF75DP51815 510 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 CEP85Q6P2H3 762 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 FILIP1Q7Z7B0 1213 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 C10orf67Q8IYJ2 551 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 FUCA2Q9BTY2 467 aa8.62□□□□□ -1.03
TRIM6-202ENST00000380097 MYOM1P52179 1685 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 MED14O60244 1454 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 SKILP12757 684 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 ZNF165P49910 485 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 TMCO3Q6UWJ1 677 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 CACTINQ8WUQ7 758 aaKnown RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 EFCC1Q9HA90 598 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 NSD2O96028 1365 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 BECN2A8MW95 431 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 NEMFO60524 1076 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 GTF2A1P52655 376 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 KRT85P78386 507 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 KRBA2Q6ZNG9 492 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 NEK11Q8NG66 645 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 TMX1Q9H3N1 280 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 CBX8Q9HC52 389 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 NRDCO43847 1150 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 RRS1Q15050 365 aaKnown RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 SLC4A10Q6U841 1118 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 LTV1Q96GA3 475 aaPredicted RBP8.61□□□□□ -1.03
TRIM6-202ENST00000380097 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
TRIM6-202ENST00000380097 RGS12O14924 1447 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-202ENST00000380097 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-202ENST00000380097 LIMCH1Q9UPQ0 1083 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 CLGNO14967 610 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 SLFNL1Q499Z3 407 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 GORABQ5T7V8 394 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-202ENST00000380097 BICD2Q8TD16 824 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
TRIM6-202ENST00000380097 MRVI1Q9Y6F6 885 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 RPGRIP1LQ68CZ1 1315 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 EFCAB6Q5THR3 1501 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 NFE2L2Q16236 605 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 ERCC6LQ2NKX8 1250 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 C8orf58Q8NAV2 365 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 UBXN4Q92575 508 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 BCCIPQ9P287 314 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM6-202ENST00000380097 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
TRIM6-202ENST00000380097 SHPRHQ149N8 1683 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 CHMLP26374 656 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 GJB2P29033 226 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 ARHGAP29Q52LW3 1261 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 HOMER1Q86YM7 354 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
TRIM6-202ENST00000380097 CCDC191Q8NCU4 936 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms