RNA–Protein interactions for RNA: ENST00000379813.7

APTX-203, Transcript of aprataxin, humanhuman

TSL 5 BASIC

Gene APTX, Length 1,121 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-203ENST00000379813 PHF14O94880 888 aa16.5■□□□□ 0.23
APTX-203ENST00000379813 PTGER2P43116 358 aa16.5■□□□□ 0.23
APTX-203ENST00000379813 TEFQ10587 303 aa16.5■□□□□ 0.23
APTX-203ENST00000379813 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
APTX-203ENST00000379813 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
APTX-203ENST00000379813 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
APTX-203ENST00000379813 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
APTX-203ENST00000379813 TMPOP42166 694 aaKnown RBP16.49■□□□□ 0.23
APTX-203ENST00000379813 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
APTX-203ENST00000379813 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
APTX-203ENST00000379813 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
APTX-203ENST00000379813 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
APTX-203ENST00000379813 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
APTX-203ENST00000379813 PNISRQ8TF01 805 aaKnown RBP16.48■□□□□ 0.23
APTX-203ENST00000379813 GNPATO15228 680 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 RIPK4P57078 832 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
APTX-203ENST00000379813 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 AK7Q96M32 723 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
APTX-203ENST00000379813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
APTX-203ENST00000379813 BTBD11A6QL63 1104 aa16.46■□□□□ 0.23
APTX-203ENST00000379813 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
APTX-203ENST00000379813 EVX2Q03828 476 aa16.46■□□□□ 0.23
APTX-203ENST00000379813 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
APTX-203ENST00000379813 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
APTX-203ENST00000379813 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
APTX-203ENST00000379813 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
APTX-203ENST00000379813 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
APTX-203ENST00000379813 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
APTX-203ENST00000379813 APAF1O14727 1248 aa16.44■□□□□ 0.22
APTX-203ENST00000379813 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
APTX-203ENST00000379813 KDM3BQ7LBC6 1761 aa16.43■□□□□ 0.22
APTX-203ENST00000379813 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
APTX-203ENST00000379813 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
APTX-203ENST00000379813 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
APTX-203ENST00000379813 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
APTX-203ENST00000379813 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
APTX-203ENST00000379813 NEFMP07197 916 aa16.42■□□□□ 0.22
APTX-203ENST00000379813 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
APTX-203ENST00000379813 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
APTX-203ENST00000379813 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
APTX-203ENST00000379813 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
APTX-203ENST00000379813 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
APTX-203ENST00000379813 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
APTX-203ENST00000379813 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
APTX-203ENST00000379813 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
APTX-203ENST00000379813 A1BGP04217 495 aa16.4■□□□□ 0.22
APTX-203ENST00000379813 SSFA2P28290 1259 aa16.4■□□□□ 0.22
APTX-203ENST00000379813 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
APTX-203ENST00000379813 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
APTX-203ENST00000379813 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
APTX-203ENST00000379813 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
APTX-203ENST00000379813 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
APTX-203ENST00000379813 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
APTX-203ENST00000379813 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
APTX-203ENST00000379813 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
APTX-203ENST00000379813 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
APTX-203ENST00000379813 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
APTX-203ENST00000379813 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
APTX-203ENST00000379813 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 GYS1P13807 737 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
APTX-203ENST00000379813 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 ARXQ96QS3 562 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
APTX-203ENST00000379813 PPP1R1BQ9UD71 204 aaPredicted RBP16.35■□□□□ 0.21
APTX-203ENST00000379813 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
APTX-203ENST00000379813 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
APTX-203ENST00000379813 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
APTX-203ENST00000379813 FKBP8Q14318 412 aa16.34■□□□□ 0.21
APTX-203ENST00000379813 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
APTX-203ENST00000379813 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
APTX-203ENST00000379813 COL15A1P39059 1388 aa16.34■□□□□ 0.21
APTX-203ENST00000379813 CHL1O00533 1208 aa16.33■□□□□ 0.2
APTX-203ENST00000379813 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
APTX-203ENST00000379813 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.2
APTX-203ENST00000379813 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
APTX-203ENST00000379813 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
APTX-203ENST00000379813 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
APTX-203ENST00000379813 RFC4P35249 363 aa16.32■□□□□ 0.2
APTX-203ENST00000379813 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
APTX-203ENST00000379813 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
APTX-203ENST00000379813 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
APTX-203ENST00000379813 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
APTX-203ENST00000379813 STARD3NLO95772 234 aa16.31■□□□□ 0.2
APTX-203ENST00000379813 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
APTX-203ENST00000379813 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
APTX-203ENST00000379813 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
APTX-203ENST00000379813 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
APTX-203ENST00000379813 MMP10P09238 476 aa16.3■□□□□ 0.2
APTX-203ENST00000379813 DDR1Q08345 913 aa16.3■□□□□ 0.2
APTX-203ENST00000379813 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
APTX-203ENST00000379813 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
APTX-203ENST00000379813 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
APTX-203ENST00000379813 ANXA1P04083 346 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms