RNA–Protein interactions for RNA: ENST00000378601.7

DDB2-203, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 1,591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-203ENST00000378601 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
DDB2-203ENST00000378601 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
DDB2-203ENST00000378601 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
DDB2-203ENST00000378601 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
DDB2-203ENST00000378601 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
DDB2-203ENST00000378601 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
DDB2-203ENST00000378601 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
DDB2-203ENST00000378601 FAM43AQ8N2R8 423 aa18.48■□□□□ 0.55
DDB2-203ENST00000378601 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
DDB2-203ENST00000378601 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
DDB2-203ENST00000378601 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.553e-7■□□□□ 10.1
DDB2-203ENST00000378601 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 ADCY9O60503 1353 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
DDB2-203ENST00000378601 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
DDB2-203ENST00000378601 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
DDB2-203ENST00000378601 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
DDB2-203ENST00000378601 ALS2Q96Q42 1657 aa18.46■□□□□ 0.55
DDB2-203ENST00000378601 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
DDB2-203ENST00000378601 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
DDB2-203ENST00000378601 DDX58O95786 925 aaKnown RBP18.46■□□□□ 0.55
DDB2-203ENST00000378601 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
DDB2-203ENST00000378601 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
DDB2-203ENST00000378601 PXDNQ92626 1479 aa18.45■□□□□ 0.54
DDB2-203ENST00000378601 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
DDB2-203ENST00000378601 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
DDB2-203ENST00000378601 BAG4O95429 457 aaKnown RBP18.45■□□□□ 0.54
DDB2-203ENST00000378601 KLHL40Q2TBA0 621 aa18.45■□□□□ 0.54
DDB2-203ENST00000378601 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
DDB2-203ENST00000378601 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
DDB2-203ENST00000378601 SSFA2P28290 1259 aa18.44■□□□□ 0.54
DDB2-203ENST00000378601 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
DDB2-203ENST00000378601 UTYO14607 1347 aa18.44■□□□□ 0.54
DDB2-203ENST00000378601 ERBB3P21860 1342 aa18.44■□□□□ 0.54
DDB2-203ENST00000378601 CNTROBQ8N137 903 aa18.43■□□□□ 0.54
DDB2-203ENST00000378601 XRCC6P12956 609 aaKnown RBP eCLIP18.42■□□□□ 0.544e-6■■■■□ 25.4
DDB2-203ENST00000378601 CUL4AQ13619 759 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
DDB2-203ENST00000378601 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 KCNQ3O43525 872 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
DDB2-203ENST00000378601 LINS1Q8NG48 757 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 PI4K2BQ8TCG2 481 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 GPATCH3Q96I76 525 aa18.42■□□□□ 0.54
DDB2-203ENST00000378601 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
DDB2-203ENST00000378601 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
DDB2-203ENST00000378601 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
DDB2-203ENST00000378601 ANO2Q9NQ90 1003 aa18.41■□□□□ 0.54
DDB2-203ENST00000378601 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
DDB2-203ENST00000378601 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
DDB2-203ENST00000378601 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
DDB2-203ENST00000378601 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
DDB2-203ENST00000378601 GRPEL1Q9HAV7 217 aa18.4■□□□□ 0.54
DDB2-203ENST00000378601 HSPA4P34932 840 aa18.39■□□□□ 0.53
DDB2-203ENST00000378601 NEK4P51957 841 aa18.39■□□□□ 0.53
DDB2-203ENST00000378601 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
DDB2-203ENST00000378601 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
DDB2-203ENST00000378601 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
DDB2-203ENST00000378601 MRC1P22897 1456 aa18.39■□□□□ 0.53
DDB2-203ENST00000378601 SGSM2O43147 1006 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
DDB2-203ENST00000378601 C9orf78Q9NZ63 289 aaPredicted RBP18.38■□□□□ 0.53
DDB2-203ENST00000378601 ATF3P18847 181 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 TMX3Q96JJ7 454 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 RAD50Q92878 1312 aa18.38■□□□□ 0.53
DDB2-203ENST00000378601 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
DDB2-203ENST00000378601 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
DDB2-203ENST00000378601 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
DDB2-203ENST00000378601 LARP1Q6PKG0 1096 aaKnown RBP18.37■□□□□ 0.53
DDB2-203ENST00000378601 SLC52A2Q9HAB3 445 aa18.37■□□□□ 0.53
DDB2-203ENST00000378601 HIP1O00291 1037 aa18.36■□□□□ 0.53
DDB2-203ENST00000378601 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
DDB2-203ENST00000378601 COL15A1P39059 1388 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 GRM8O00222 908 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 OS9Q13438 667 aaPredicted RBP18.35■□□□□ 0.53
DDB2-203ENST00000378601 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
DDB2-203ENST00000378601 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 CPDO75976 1380 aa18.35■□□□□ 0.53
DDB2-203ENST00000378601 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 PHKG2P15735 406 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 ZNF445P59923 1031 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 XPCQ01831 940 aaPredicted RBP18.34■□□□□ 0.53
DDB2-203ENST00000378601 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 CADPS2Q86UW7 1296 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 IFNL2Q8IZJ0 200 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 COL18A1P39060 1754 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
DDB2-203ENST00000378601 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
DDB2-203ENST00000378601 BRD1O95696 1058 aa18.33■□□□□ 0.52
DDB2-203ENST00000378601 NEXNQ0ZGT2 675 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms